Job Description P76223 Confidence 100.00% Date Thu Jan 5 12:20:50 GMT 2012 Rank 45 Aligned Residues 351 % Identity 11% Template c3i3vC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:probable secreted solute-binding lipoprotein; PDBTitle: crystal structure of probable secreted solute-binding2 lipoprotein from streptomyces coelicolor Resolution 2.30 Å

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		29	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.
Predicted Secondary structure														.																						.																																								.
Query SS confidence														.																						.																																								.
Query Sequence		E	A	K	G	Q	T	V	W	F	N	A	W	.	G	G	D	T	A	I	N	R	Y	L	D	W	V	S	G	E	M	K	T	H	Y	.	A	I	N	L	K	I	V	R	L	A	D	A	A	D	A	V	K	R	I	Q	T	E	A	A	A	G	R	K	T	G	G	S	V	D	L	L	W	V	N	.	G	E	N	F	R
Query Conservation														.																						.																																								.
Alig confidence														.																						.											.	.																.	.	.	.									.
Template Conservation																																															.	.																.	.	.	.
Template Sequence		D	S	D	P	D	T	L	V	V	H	T	Q	L	G	T	T	A	P	G	S	P	T	Y	L	A	A	V	D	R	F	R	E	E	N	P	G	V	K	I	K	N	L	V	N	G	.	.	D	D	L	A	Q	V	Y	E	T	S	R	L	A	R	K	.	.	.	.	E	A	D	V	V	X	V	N	L	Y	D	K	T	L
Template Known Secondary structure				S	T	T							S		S	S	S	S	T	T																T	T									S	.	.	T	T											T	T		.	.	.	.			S							S	T	T	G	G
Template Predicted Secondary structure																																															.	.																.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.																										.	.	.	.	.
Query SS confidence																																			.																										.	.	.	.	.
Query Sequence		T	L	K	E	A	N	L	L	Q	T	G	W	A	E	T	L	P	N	W	R	Y	V	D	T	Q	L	P	V	R	E	D	F	S	.	V	P	T	Q	G	A	E	S	P	W	G	G	A	Q	L	T	F	I	A	R	R	D	V	T	P	.	.	.	.	.	Q	P	P	Q	T	P	Q	A	L	L	E	F	A	K	A	N
Query Conservation																																			.																										.	.	.	.	.
Alig confidence																																			.																										.	.	.	.	.
Template Conservation
Template Sequence		A	W	T	D	V	G	A	T	V	D	V	K	P	Y	L	D	D	W	G	L	R	G	R	V	L	P	A	A	L	A	D	W	T	D	D	E	G	R	V	R	A	F	P	Y	F	A	T	N	W	P	V	A	Y	N	R	A	L	L	D	R	A	G	V	D	A	I	P	T	T	G	D	Q	L	I	A	A	A	R	K	L
Template Known Secondary structure		G					T	S	S									G	G	G		T	T	S	B								T	B		T	T	S		B		S	B																				T			S				B
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		P	G	T	V	T	Y	P	.	.	.	R	P	P	D	F	T	G	T	A	F	L	E	Q	L	L	I	M	L	T	P	D	P	A	A	L	K	E	A	P	D	D	A	T	F	A	R	V	T	A	P	L	W	Q	Y	L	D	V	L	H	P	Y	L	W	R	E	G	K	D	F	P	P	S	P	A	R	M	D	A	L	L
Query Conservation									.	.	.
Alig confidence									.	.	.
Template Conservation
Template Sequence		R	A	K	G	I	A	P	V	T	V	G	G	N	D	W	T	G	Q	K	L	L	A	Q	I	I	Q	T	F	L	S	Q	D	E	A	R	H	V	Y	S	T	G	D	F	G	V	R	G	A	R	L	G	I	E	Y	F	A	H	L	R	D	A	G	V	F	A	D	K	A	Q	G	L	T	S	D	S	X	T	T	Q	F
Template Known Secondary structure				T	T								T	T	S												G	G	G													T		T	T	S																T	T		B		T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.										.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.																.
Query SS confidence																																							.	.	.	.	.	.	.	.	.																.
Query Sequence		K	A	G	T	L	R	L	S	L	T	F	N	P	A	H	A	Q	Q	K	I	A	S	G	D	L	P	A	S	S	Y	S	F	G	F	R	E	G	.	.	.	.	.	.	.	.	.	M	I	G	N	V	H	F	V	T	I	P	A	N	A	N	.	A	S	A	A	A	K	V	V	A	N	F	L	L	S	P	D	A	Q
Query Conservation																																							.	.	.	.	.	.	.	.	.																.
Alig confidence												.																											.	.	.	.	.	.	.	.	.																.
Template Conservation												.
Template Sequence		N	T	E	E	A	A	V	Q	S	A	.	X	S	S	A	L	A	K	V	P	E	K	V	A	G	H	T	E	V	G	G	W	P	L	A	D	G	A	A	H	D	G	P	T	V	I	R	A	Y	T	L	I	G	F	W	I	S	P	N	G	V	R	K	I	E	Q	V	E	K	F	L	R	F	X	Y	R	P	D	V	V
Template Known Secondary structure			T	T	S							.						T	T	S							T						B		B		T	T		S	S	S	S									S	S											T												T	S
Template Predicted Secondary structure												.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.			.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		L	R	K	A	D	P	A	V	W	G	D	P	S	V	L	D	P	Q	K	L	P	D	G	Q	R	E	S	L	Q	S	R	M	P	Q	D	L	P	P	V	L	A	E	.	.	P	H	A	G	W	V	N	A	L	E	Q	E	W	L	H	R	Y	G
Query Conservation																																												.	.
Alig confidence																																												.	.
Template Conservation
Template Sequence		A	R	F	V	T	E	S	G	R	D	X	A	L	R	T	D	A	V	S	T	G	F	P	L	V	G	A	A	Q	R	L	G	S	E	V	S	Q	V	L	L	P	D	V	Y	V	P	P	A	A	A	Q	P	L	I	T	A	T	S	T	S	F	T
Template Known Secondary structure													S	B			S				T	T	S								T			T	T	S						G	G	G	T	S																	S
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions