Job Description P76223 Confidence 45.06% Date Thu Jan 5 12:20:50 GMT 2012 Rank 107 Aligned Residues 128 % Identity 12% Template c2zzxD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:abc transporter, solute-binding protein; PDBTitle: crystal structure of a periplasmic substrate binding protein in2 complex with lactate Resolution 1.75 Å

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		35	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.																									.		.
Query SS confidence					.	.	.																									.		.
Query Sequence		V	W	F	.	.	.	N	A	W	G	G	D	T	A	I	N	R	Y	L	D	W	V	S	G	E	M	K	T	H	Y	.	A	.	I	N	L	K	I	V	R	L	A	D	A	A	D	A	V	K	R	I	Q	T	E	A	A	A	G	R	K	T	G	G	S	V	D	L	L	W	V	N	G	E	N	F	R	T	L	K	E
Query Conservation					.	.	.																									.		.
Alig confidence					.	.	.																									.		.														.												.	.	.	.	.
Template Conservation																																																.												.	.	.	.	.
Template Sequence		Y	R	W	R	I	Q	T	A	W	D	A	G	T	V	G	Y	S	L	F	Q	K	F	T	E	R	V	K	E	L	T	D	G	Q	L	E	V	Q	P	F	P	A	G	A	V	V	G	.	T	F	D	M	F	D	A	V	K	T	G	.	.	.	.	.	V	L	D	G	M	N	P	F	T	L	Y	W	A	G	R	M	P
Template Known Secondary structure									S	S		T	T	S																	T	T	T	S								T	T	S	S	S		.	G	G	G								T	.	.	.	.	.	S	S	S					B	G	G	G	G	T	T	T		G
Template Predicted Secondary structure																																																.												.	.	.	.	.
Template SS confidence
		3034	.	.	.	.	.	3040	.	.	.	.	.	.	.	.	.	3050	.	.	.	.	.	.	.	.	.	3060	.	.	.	.	.	.	.	.	.	3070	.	.	.	.	.	.	.	.	.		3080	.	.	.	.	.	.	.	.	.	3090						.	.	.	.	.	.	.	.	.	3100	.	.	.	.	.	.	.
		110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		A	N	L	L	Q	T	G	.	.	.	.	.	.	W	A	E	T	L	P	N	W	R	Y	V	D	T	Q	L	P	V	R	E	D	F	S	V	P	T	Q	G	A	E	S	P	W	G	G	A	Q	L	T	F	I	A	R	R	D	V	T	P	Q	P	P	Q	T	P	Q	A	L
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																																													.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		V	T	A	F	L	S	S	Y	A	L	G	L	D	R	P	D	Q	W	E	T	W	F	Y	S	L	G	G	L	D	I	A	R	R	A	F	A	E	Q	G	L	F	Y	V	G	P	V	Q	H	D	L	N	I	I	H	S	K	K	.	.	.	.	P	I	R	R	F	E	D	F
Template Known Secondary structure		G	G	G	G	S	S			T	T	S			S										T	S	S											T	T	T																	S	S	.	.	.	.				S	G	G	G	G
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		3108	.	3110	.	.	.	.	.	.	.	.	.	3120	.	.	.	.	.	.	.	.	.	3130	.	.	.	.	.	.	.	.	.	3140	.	.	.	.	.	.	.	.	.	3150	.	.	.	.	.	.	.	.	.	3160	.	.	.	.					.	.	.	.	.	3170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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