Phyre 2 alignment of P76223 with c2pt1A

Job Description P76223
Confidence 100.00% Date Thu Jan 5 12:20:50 GMT 2012

Rank 52 Aligned Residues 306

% Identity 14% Template c2pt1A_

PDB info PDB header:metal transport Chain: A: PDB Molecule:iron transport protein; PDBTitle: futa1 synechocystis pcc 6803

Resolution 2.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	Q	T	V	W	F	N	A	W	G	G	D	T	A	I	N	R	Y	L	D	W	V	S	G	E	M	K	T	H	Y	A	I	N	L	K	I	V	R	L	A	D	A	A	D	A	V	K	R	I	Q	T	E	A	A	A	G	R	K	T	G	G	S	V	D	L	L	W	V	N	G	E	N	F	R	T	L	K	E	A	N
Query Conservation
Alig confidence													.	.	.	.																									.																	.	.	.	.
Template Conservation													.	.	.	.																									.																	.	.	.	.
Template Sequence	Q	Q	E	I	N	L	Y	S	S	R	H	Y	.	.	.	.	N	T	D	N	E	L	Y	A	K	F	T	A	E	T	G	I	K	V	N	L	I	E	G	K	.	A	D	E	L	L	E	R	I	K	S	E	G	A	N	S	P	.	.	.	.	A	D	V	L	L	T	V	D	L	A	R	L	W	R	A	E	E	D	G
Template Known Secondary structure									S				.	.	.	.	T	T																							.												G	G	G			.	.	.	.								S										T	T
Template Predicted Secondary structure													.	.	.	.																									.																	.	.	.	.
Template SS confidence
	44	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

	112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence	L	L	Q	T	G	W	A	E	T	L	P	N	W	R	Y	V	D	T	Q	L	P	V	R	E	D	F	S	V	P	T	Q	G	A	E	S	P	W	G	G	A	Q	L	T	F	I	A	R	R	D	V	T	P	Q	P	.	P	Q	T	P	Q	A	L	L	E	F	A	K	A	N	P	G	T	V	T	Y	P	R	P	P	D
Query Conservation																																																							.
Alig confidence																		.	.	.	.	.	.	.	.	.																													.								.	.
Template Conservation																		.	.	.	.	.	.	.	.	.																																					.	.
Template Sequence	I	F	Q	P	V	Q	S	E	I	L	E	T	N	V	P	E	Y	.	.	.	.	.	.	.	.	.	L	R	S	P	D	G	M	W	F	G	F	T	K	R	A	R	V	I	M	Y	N	K	G	K	V	K	P	E	E	L	S	T	Y	E	E	L	.	.	A	D	P	K	W	K	G	R	V	I	I	R	S	S	S	N
Template Known Secondary structure		B												S		G	G	.	.	.	.	.	.	.	.	.	G	B		T	T	S	S															T	T	T			G	G	G				S	G	G	G	.	.	G	S	G	G	G	T	T		B					T	T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.																																					.	.
Template SS confidence
	115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.										.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

	191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence	F	T	G	T	A	F	L	E	Q	L	L	I	M	L	T	P	D	P	A	A	L	K	E	A	P	D	D	A	T	F	A	R	V	T	A	P	L	W	Q	Y	L	D	V	L	H	P	Y	L	W	R	E	G	K	D	F	P	P	S	P	A	R	M	D	A	L	L	K	A	G	T	L	R	L	S	L	T	F	N	P	A
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	E	Y	N	Q	S	L	V	A	S	L	V	V	A	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	S	T	L	A	W	A	K	G	F	V	S	N	F	A	R	E	P	Q	G	N	D	T	A	Q	I	E	A	V	S	S	G	E	A	D	L	T	L	A	N	T	Y	Y
Template Known Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	B	S	S				S												T	S		S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	184	.	.	.	.	.	190	.	.	.	.	.	.	.	.																						.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

	271	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290	.	.				.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure															.	.	.	.									.	.	.
Query SS confidence															.	.	.	.									.	.	.
Query Sequence	H	A	Q	Q	K	I	A	S	G	D	L	P	A	S	.	.	.	.	S	Y	S	F	G	F	R	E	.	.	.	G	M	I	G	N	V	H	F	V	T	I	P	A	N	A	N	A	S	A	A	A	K	V	V	A	N	F	L	L	S	P	D	A	Q	L	R	K	A	D	P	A	V	W	G	D	P	S	V	L	D	P
Query Conservation															.	.	.	.									.	.	.
Alig confidence															.	.	.	.									.	.	.																																										.	.
Template Conservation																																																																							.	.
Template Sequence	M	G	R	L	L	E	S	E	D	P	A	Q	K	A	I	A	E	N	V	G	V	F	F	P	N	Q	E	G	R	G	T	H	V	N	V	S	G	V	G	V	V	K	T	A	P	N	R	E	G	A	V	K	F	I	E	F	L	V	S	E	P	A	Q	A	F	L	A	Q	N	N	.	.	Y	E	Y	P	V	L	A	G
Template Known Secondary structure						T		S										T								T	T	T	T		B										B	T	T		T	T												T	S												.	.					S	S	T	T
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
	243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320

	344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence	Q	K	L	P	D	G	Q	R	E	S	L	Q	S	R	M	P	Q	D	L	P	P	V	L	A	E	P	H	A	G	W	V	N	A	L	E	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence	V	P	L	N	K	S	V	A	S	F	G	E	F	K	S	D	T	T	S	L	D	K	L	G	P	A	L	A	P	A	T	K	I	M	N	E	A
Template Known Secondary structure									T	T					B			S		G	G	G	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
	321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions