Job Description P76223 Confidence 41.10% Date Thu Jan 5 12:20:50 GMT 2012 Rank 109 Aligned Residues 127 % Identity 12% Template c2pfzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative exported protein; PDBTitle: crystal structure of dctp6, a bordetella pertussis2 extracytoplasmic solute receptor binding pyroglutamic acid Resolution 1.80 Å

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		33	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.		.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure									.																							.		.								.	.	.
Query SS confidence									.																							.		.								.	.	.
Query Sequence		Q	T	V	W	F	N	A	.	W	G	G	D	T	A	I	N	R	Y	L	D	W	V	S	G	E	M	K	T	H	Y	.	A	.	I	N	L	K	I	V	R	.	.	.	L	A	D	A	A	D	A	V	K	R	I	Q	T	E	A	A	A	G	R	K	T	G	G	S	V	D	L	L	W	V	N	G	E	N	F	R	T
Query Conservation									.																							.		.								.	.	.
Alig confidence									.																							.		.								.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.
Template Sequence		T	K	W	D	L	P	T	A	Y	P	A	S	N	L	H	V	E	N	L	T	Q	F	V	K	D	V	D	S	L	S	G	G	K	L	K	I	T	L	H	N	N	A	S	L	Y	K	A	P	E	I	K	R	A	V	Q	G	.	.	.	.	.	.	.	.	.	N	Q	A	Q	I	G	E	I	L	L	T	N	F	A	N
Template Known Secondary structure									S	S		T	T	S																		T	T	S								T	T	S	S	S		G	G	G							T	.	.	.	.	.	.	.	.	.	T	S	S	S						G	G	G	G	T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.										.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		107	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		L	K	E	A	N	L	L	Q	T	G	W	A	.	.	.	E	T	L	P	N	W	R	Y	V	D	T	Q	L	P	V	R	E	D	F	S	V	P	T	Q	G	A	E	S	P	W	G	G	A	Q	L	T	F	I	A	R	R	D	V	T	P	Q	P	P	Q	T	P	Q	A	L
Query Conservation														.	.	.
Alig confidence														.	.	.																																										.	.	.	.
Template Conservation																																																										.	.	.	.
Template Sequence		E	D	P	V	Y	E	L	D	G	L	P	F	L	A	T	G	Y	D	A	S	F	K	L	Y	Q	A	Q	K	P	F	L	E	K	K	L	A	S	Q	G	M	M	L	L	Y	S	V	A	W	P	P	Q	G	I	F	A	N	.	.	.	.	R	D	I	K	Q	V	S	D	M
Template Known Secondary structure		T		G	G	G	T	G	G	G	S	T	T	S			S																					T	T	T																	S	.	.	.	.	S			S	S	G	G	G	G
Template Predicted Secondary structure																																																										.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions