Job Description P76223 Confidence 70.14% Date Thu Jan 5 12:20:50 GMT 2012 Rank 98 Aligned Residues 133 % Identity 11% Template c2hpgB_ PDB info PDB header:ligand binding protein Chain: B: PDB Molecule:abc transporter, periplasmic substrate-binding PDBTitle: the crystal structure of a thermophilic trap periplasmic2 binding protein Resolution 1.90 Å

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		30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure											.																								.		.
Query SS confidence											.																								.		.
Query Sequence		A	K	G	Q	T	V	W	F	N	.	A	W	G	G	D	T	A	I	N	R	Y	L	D	W	V	S	G	E	M	K	T	H	Y	.	A	.	I	N	L	K	I	V	R	L	A	D	A	A	D	A	V	K	R	I	Q	T	E	A	A	A	G	R	K	T	G	G	S	V	D	L	L	W	V	N	G	E	N	F	R	T
Query Conservation											.																								.		.
Alig confidence											.																								.		.													.													.	.	.	.	.
Template Conservation																																																		.													.	.	.	.	.
Template Sequence		G	A	K	Y	T	L	R	F	G	H	V	L	A	P	G	E	P	Y	H	Q	A	F	L	K	W	A	K	A	V	E	E	K	T	N	G	D	V	R	I	E	V	F	P	S	S	Q	L	G	.	V	E	E	D	I	I	E	Q	I	R	X	G	.	.	.	.	.	A	P	V	G	W	N	T	D	S	A	R	L	G	X
Template Known Secondary structure				S											T	T	S	T																T	T	T	S											T	T	.	T										T	T	.	.	.	.	.		S											T	T
Template Predicted Secondary structure																																																		.													.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.	.	.	.	90	.	.	.	.
		107	.	.	110	.	.	.	.	.	.															.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Query Sequence		L	K	E	A	N	L	L	Q	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	A	E	T	L	P	N	W	R	Y	V	D	T	Q	L	P	V	R	E	D	F	S	V	P	T	Q	G	A	E	S	.	P	W	G	G	A	Q	L	T	F	I	A	R	R	D	V	T	P	Q	P	P	Q	T	P	Q	A
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.														.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		Y	V	K	D	I	G	V	X	N	L	A	Y	F	I	D	F	X	G	A	K	T	P	E	E	A	I	E	V	L	K	K	I	K	Q	S	P	T	X	Q	K	W	L	K	E	L	E	Q	R	F	G	I	K	V	L	S	F	Y	W	V	Q	G	Y	R	H	F	V	T	N	.	.	.	.	K	P	I	R	K	P	E	D
Template Known Secondary structure		T	S	G	G	G	G	G	G	G	S	T	T					T	T			S														S																																	S	.	.	.	.	S				S	G	G	G
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170
		172
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		171

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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