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Job DescriptionP76223
Confidence99.22%DateThu Jan 5 12:20:50 GMT 2012
Rank77Aligned Residues236
% Identity10%Templatec1twyG_
PDB info PDB header:structural genomics, unknown functionChain: G: PDB Molecule:abc transporter, periplasmic substrate-binding protein; PDBTitle: crystal structure of an abc-type phosphate transport receptor from2 vibrio cholerae
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60. ........70.........80.........90.........100.........110.........
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Query Sequence  GGDTAINRYLDWVSGEMKTHY. AINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAE
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Template Sequence  SGSTSVARIXDVLAEKYNQQHPETYVAVQGVG. STAGISLLKK. . . . . . . . . GVADIAXTS. . . . . . . . . . . . . . . . . . .
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   33......40.........50.........60.... .....70.... .....80...
 
   120.........130.........140.........150.........160.........170.........180.........190. .
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Query Sequence  TLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRDVTPQPPQTPQALLEFAKANPGTVTYPRPPDF. . . . . . . T
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Template Sequence  . . . . . . . . . . . . RYLTESEAQNTLHTFTLAFDGLAIVVNQANPV. TNLTREQLYGIYKGQITNWKQVGGNDQKIAVVTRE
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   84.....90.........100.........110..... ....120.........130.........140.........150
 
   193......200.........210.........220.........230.........240.........250.........260.........270..
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Query Sequence  GTAFLEQLLIMLTPDPAALKEAPDDATFARVTAPLWQYLDVLHPYLWREGKDFPPSPARMDALLKAGTLRLSLTFNPAHA
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Template Sequence  ASSGTRYSFESLXGLTKTVKDREVSD. . . . . . . . . . . . . . . . . . . VAPTALVVNSNSXXKTLVNHNTQAVGFISIGSVDK
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   151........160.........170...... ...180.........190.........200.........210.
 
   273......280.........290.........300.........310.........320.........330.......
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Query Sequence  QQKIASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFLLSPDAQLRKADPAVWGD
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Template Sequence  SVKAIQFEKADPTSDNIAKHTYQLSRPFLILHYSDNADEQTKEFIAFLKSESAKKLIVEYGYIXP
Template Known Secondary structure  TSTTB


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   212.......220.........230.........240.........250.........260.........270......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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