Return to main results Retrieve Phyre Job Id

Job DescriptionP07604
Confidence98.85%DateThu Jan 5 11:00:21 GMT 2012
Rank117Aligned Residues201
% Identity18%Templated1sxja2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   201........210.........220.. .......230.........240.........250.........260.....
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Query Sequence  SAFSQIVAVSPKMKHVVEQAQK. . . . . . . . . . . . . . . LAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCAS
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Template Sequence  TNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQE. . . LGYDILEQNASD
Template Known Secondary structure  SSGGG

S
TTTT



TTSTTS
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STTSS...TT

TTS
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   305....310.........320.........330.........340.........350.........360......... 370.........380.
 
   266...270.........280.. .......290.........300.........310.........320.........330.........
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Query Sequence  IPEDAVESELFGHAPEG. . . . . . KKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICAT
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Template Sequence  VRSKTLLNAGVKNALDNMSVVGYFKHQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQF. . . . . . . . CRKTSTPLILICNE
Template Known Secondary structure 


TGGGGTT


STTTTT


SSTTS
SGGG

TTSTT........
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   382.......390.........400.........410.........420.........430......... 440.........450...
 
   340.........350.........360.........370.........380.........390.........400.........410.........
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Query Sequence  QKNLVELVQKGMFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLAADLNTVLTRYAWPGNVRQL
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Template Sequence  RNL. . . . . . . . PKMRPFDRVCLDIQFRRPDANSIKS. . . . . . . . RLMTIAIREKFK. . . LDPNVIDRLIQTT. RGDIRQV
Template Known Secondary structure  TTS........STTGGGTTTS




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   458.460 .........470.........480..... ....490....... ..500.........510 .......
 
   420.........430..
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Query Sequence  KNAIYRALTQLDG
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Template Conservation 
  
         
Template Sequence  INLLSTISTTTKT
Template Known Secondary structure  TSS
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   518.520.........530
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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