Return to main results Retrieve Phyre Job Id

Job DescriptionP07604
Confidence98.80%DateThu Jan 5 11:00:21 GMT 2012
Rank122Aligned Residues159
% Identity18%Templated1jbka_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VSAFSQIVAVSPKMKHVVEQAQKLAMLSAPLLITGDTGTGKDLFAYACHQA. . . . . . . SPRAGKPYLALNCASI. PEDAV
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Template Sequence  QGKLDPVIGRDEEIRRTIQVLQR. . RTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKY
Template Known Secondary structure  TT
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Query Sequence  ESELFGHAPEGKKGFFEQANGGSVLLDEIGEM. . SPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKNLVELVQK
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Template Sequence  RGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAMDAGNMLKPALARGE. . . . . . . . . . . . . LHCVGATT. . LDEYRQY
Template Known Secondary structure  STTTTGGGGTT



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   252.......260.........270.........280.........290.........300. ........ 310......
 
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Query Sequence  GMFREDLYYRLNVLTLNLPPLRDCPQ
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Template Sequence  IEKDAALERRFQKVFVAEPSVEDTIA
Template Known Secondary structure  TTT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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