Return to main results Retrieve Phyre Job Id

Job DescriptionP07604
Confidence99.34%DateThu Jan 5 11:00:21 GMT 2012
Rank44Aligned Residues205
% Identity17%Templated1iqpa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   202.......210.........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  AFSQIVAVSPKMKHVVEQAQKLAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELFGHAPE
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Template Sequence  RLDDIVGQEHIVKRLKHYVKT. . GSMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIREKVKEF
Template Known Secondary structure  STTT

S
..T


S
TTSSGGGTT
TT
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   23......30.........40... ......50.........60.........70.........80.........90.........100
 
   282.......290.........300.........310.........320.........330.........340.........350.........360.
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Query Sequence  GKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKNLVELVQKGMFREDLYYRLN
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Template Sequence  ARTKPIGGASFKIIFLDEADALTQDAQQALRRTMEM. . . . . . . . . . . FSSNVRFILSCNYS. . . . . . . SKIIEPIQSRCA
Template Known Secondary structure  S

GGG
S
TGGGS
...........TTTTS
G.......GGS
T
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   101........110.........120.........130...... ...140.........150 .........160..
 
   362.......370.........380.........390.........400.........410.........420.........430.........440
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Query Sequence  VLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLAADLNTVLTRYAWPGNVRQLKNAIYRALTQLDGYELRPQDI
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Template Sequence  IFRFRPLRDEDIAKRLRYIAEN. . . . . . . . . . . EGLELTEEGLQAILYIA. EGDMRRAINILQAAAAL. . DKKITDENV
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T...........TT

.TT
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   163......170.........180.... .....190.........200. ........210........ .220.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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