Return to main results Retrieve Phyre Job Id

Job DescriptionP07604
Confidence99.39%DateThu Jan 5 11:00:21 GMT 2012
Rank38Aligned Residues188
% Identity18%Templated1d2na_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   206...210.........220... ......230.........240.........250.........260.........270.......
Predicted Secondary structure 




........

























Query SS confidence 

















. . . . . . . .





















































Query Sequence  IVAVSPKMKHVVEQAQKL. . . . . . . . AMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELFG
Query Conservation 

  
             ........
    



 

 



   
  

  
      

 
 
           


Alig confidence 

















........


























...























Template Conservation            
                    



 







 

  

  ...     
 
                
Template Sequence  IIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEE. . . SNFPFIKICSPDKMIGFSETAKCQ
Template Known Secondary structure 



S
SS
S
STTSS...T
S
GGG
TT

Template Predicted Secondary structure 



















...










Template SS confidence 















































































   515....520.........530.........540.........550.........560....... ..570.........580.........590.
 
   278.280.........290 .........300... ......310.........320.........330.........340. .
Predicted Secondary structure 








...




..........













..
Query SS confidence 












. . .












. . . . . . . . . .





































. .
Query Sequence  HAPEGKKGFFEQA. . . NGGSVLLDEIGEM. . . . . . . . . . SPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQK. . N
Query Conservation         
    
...  


 
  
  
..........    
  
   
                  
 
  
  .. 
Alig confidence 



....




...












..........












........
















..
Template Conservation      .... 
  
      

 




 
                 
     ........        



 


    
Template Sequence  AMKK. . . . IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLK. . . . . . . . KAPPQGRKLLIIGTTSRKDV
Template Known Secondary structure  ....TSS

TT
BTTTTB

TT........


STT
S
Template Predicted Secondary structure  ....









........










Template SS confidence 















































































   592... ....600.........610.........620.........630......... 640.........650.........
 
   343......350.........360.........370.........380.........390.........400.........410.........420..
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  LVELVQKGMFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLAADLNTVLTRYAWPGNVRQLKNA
Query Conservation 
        
   
   
    
 






 


  
    
                 
   
    




 

   
Alig confidence 












.........










.........





































Template Conservation 
    
  

   .........
  
       .........
   
             
            

 
   
Template Sequence  LQEMEMLNAFSTT. . . . . . . . . IHVPNIATGEQ. . . . . . . . . LLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLML
Template Known Secondary structure  TT
TTTSS.........


.........T
S
TTS
Template Predicted Secondary structure 







.........




.........











Template SS confidence 















































































   660.........670.. .......680... ......690.........700.........710.........720.
 
   423...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  IYRA
Query Conservation 
   
Alig confidence 



Template Conservation   
  
Template Sequence  IEMS
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   722...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions