Job Description P07604 Confidence 98.38% Date Thu Jan 5 11:00:21 GMT 2012 Rank 142 Aligned Residues 216 % Identity 8% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250						.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.
Predicted Secondary structure																						.	.																												.	.	.	.	.																		.
Query SS confidence																						.	.																												.	.	.	.	.																		.
Query Sequence		S	Q	I	V	A	V	S	P	K	M	K	H	V	V	E	Q	A	Q	K	L	.	.	A	M	L	S	A	P	L	L	I	T	G	D	T	G	T	G	K	D	L	F	A	Y	A	C	H	Q	A	.	.	.	.	.	S	P	R	A	G	K	P	Y	L	A	L	N	C	A	S	I	P	.	E	D	A	V	E	S	E	L
Query Conservation																						.	.																												.	.	.	.	.																		.
Alig confidence																						.	.																												.	.	.	.	.																		.
Template Conservation
Template Sequence		E	L	L	K	S	Q	V	E	D	F	T	R	I	F	L	P	I	Y	D	S	L	X	S	S	Q	N	K	L	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N	D	V	X	D	E	L	I	T	S	S	A	R	K	E	L	P	I	F	D	Y	I	H	I	D	A	L	E	L	X	D	A	L	Y	E	K	I
Template Known Secondary structure																								T	T												S																	T	T	T	T	T	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.														.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		F	G	H	A	P	E	G	K	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	F	F	E	Q	A	N	G	G	S	V	L	L	D	E	I	G	E	M	.	S	P	R	M	Q	A	K	L	L	R	F	L	N	D	G	T	F	R	R	V	G	E	D	H	E	V	H	V	D	V	R	V	I	C	A	T	Q	K
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																			.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	F	A	I	S	K	E	N	G	D	I	S	L	E	A	L	N	F	Y	I	T	N	V	P	K	A	K	K	R	K	T	L	I	L	I	Q	N	P	E	N	L	L	S	E	K	I	L	Q	Y	F	E	K	W	I	S	S	.	.	.	.	.	.	.	.	.	.	.	K	N	S	K	L	S	I	I	C	V	G	G	H
Template Known Secondary structure						S																		S		G	G	G	S											S	S	S			T													.	.	.	.	.	.	.	.	.	.	.	S	S											S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		629	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.												.	.	.	.	.	690	.	.	.	.	.	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.																					.	.	.	.	400	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	V	E	L	V	Q	K	G	M	F	R	E	D	L	Y	Y	R	L	N	V	L	T	L	N	L	P	P	L	R	D	C	P	Q	D	I	M	P	L	T	E	L	F	V	A	R	F	A	D	E	Q	G	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	K	L	A	A
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.																			.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.																			.	.
Template Sequence		N	V	T	I	R	E	Q	.	.	.	I	N	I	X	P	S	L	K	A	H	F	T	E	I	K	L	N	K	.	.	V	D	K	N	E	L	Q	Q	X	I	I	T	R	L	K	S	L	L	K	P	F	H	V	K	V	N	D	K	K	E	X	T	I	Y	N	N	I	P	D	N	V	I	V	I	N	H	K	I	N	N
Template Known Secondary structure		S							.	.	.			T						T	T									.	.																											T	T											T	T
Template Predicted Secondary structure									.	.	.																			.	.
Template SS confidence
		700	.	.	.	.	.	.				.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.			.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.			.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		D	L	N	T	V	L	T	R	Y	A	W	.	.	P	G	N	V	R	Q	L	K	N	A	I	Y	R	A	L	T	Q	L	D	G	Y	E	L
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		K	I	T	Q	L	I	A	K	N	V	A	N	V	S	G	S	T	E	K	A	F	K	I	C	E	A	A	V	E	I	S	K	K	D	F	V
Template Known Secondary structure																	S
Template Predicted Secondary structure
Template SS confidence
		783	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions