Job Description P07604 Confidence 97.65% Date Thu Jan 5 11:00:21 GMT 2012 Rank 161 Aligned Residues 185 % Identity 17% Template c3qmzA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:cytoplasmic dynein heavy chain; PDBTitle: crystal structure of the cytoplasmic dynein heavy chain motor domain Resolution 6.00 Å

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		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		Q	A	Q	K	L	A	M	L	S	A	P	L	L	I	T	G	D	T	G	T	G	K	D	L	F	A	Y	A	C	H	Q	A	S	P	R	A	G	K	P	Y	L	A	L	N	C	A	S	.	I	P	E	D	A	V	E	S	E	L	F	G	H	A	P	E	G	K	K	G	F	F	E	Q	A	N	G	G	S	V	L	L
Query Conservation																																																	.
Alig confidence																															.	.	.																.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	T	D	S	L	H	Q	K	Y	G	G	C	F	F	G	P	A	G	T	G	K	T	E	T	V	K	A	F	.	.	.	G	Q	N	L	G	R	V	V	V	V	F	N	C	D	D	S	F	D	Y	Q	V	L	S	R	L	L	V	G	I	T	Q	I	G	A	.	.	.	.	.	.	.	.	.	.	W	G	C	F
Template Known Secondary structure									T	T	T	T							T	T	S	S									.	.	.	T	S	S											S	S	S	S		S												T	T			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1781	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.				1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.											.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.										.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.
Query Sequence		D	E	I	G	E	M	S	P	R	M	Q	A	K	L	L	R	F	L	.	.	.	.	.	.	.	.	.	N	D	G	T	F	R	R	V	G	E	D	H	E	V	H	V	D	V	R	V	I	C	A	T	Q	K	N	L	V	E	L	V	Q	K	G	M	F	R	E	D	L	Y	Y	R	L	N	V	L	T	L	N	L	P
Query Conservation																				.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		D	E	F	N	R	L	D	E	K	V	L	S	A	V	S	A	N	I	Q	Q	I	Q	N	G	L	Q	V	G	K	S	H	I	T	L	L	E	E	E	T	P	L	S	P	H	T	A	V	F	I	T	L	.	.	.	.	.	.	.	.	.	.	.	.	L	P	E	N	L	K	K	S	F	R	E	F	S	M	.	K	S
Template Known Secondary structure			T	T	T	T	S	S																	T	S	T	T	S	S	S						S	S															.	.	.	.	.	.	.	.	.	.	.	.							T	T	T						.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		1848	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.													.	1900	.	.	.	.	.	.	.	.	.	1910	.	.		.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.			.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		P	L	R	D	C	P	Q	D	I	M	P	L	T	E	L	F	V	A	.	.	R	F	A	D	E	Q	G	V	P	R	P	K	L	A	A	D	L	N	T	V	L	T	R	Y	A	W	P	G	N	V	R	Q	L	K	N	A	I	Y	R	A	L	T	Q	L	D	G	Y
Query Conservation																				.	.
Alig confidence				.																.	.							.																				.	.
Template Conservation				.																								.																				.	.
Template Sequence		Q	S	.	G	T	I	A	E	M	I	L	Q	I	M	G	F	E	D	S	K	S	L	A	S	K	I	.	V	H	F	L	E	L	L	S	S	K	C	S	S	M	N	H	Y	H	F	.	.	G	L	R	T	L	K	G	V	L	R	N	C	S	P	L	I	S	E	F
Template Known Secondary structure				.													T	S	S									.													S	S	S					.	.																			S
Template Predicted Secondary structure				.																								.																				.	.
Template SS confidence
		1925	.		.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.		1950	.	.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.			.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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