Job Description P07604 Confidence 98.22% Date Thu Jan 5 11:00:21 GMT 2012 Rank 146 Aligned Residues 186 % Identity 18% Template c3pxgA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca121 and clpc1-485 complex Resolution 3.65 Å

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		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		F	S	Q	I	V	A	V	S	P	K	M	K	H	V	V	E	Q	A	Q	K	L	A	M	L	S	A	P	L	L	I	T	G	D	T	G	T	G	K	D	L	F	A	Y	A	C	H	Q	A	S	P	R	A	G	K	P	Y	L	A	L	N	C	A	S	I	P	E	D	A	V	E	S	E	L	F	G	H	A	P	E	.
Query Conservation																																																																																	.
Alig confidence																						.	.																																.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																						.	.																																.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	P	V	I	G	R	S	K	E	I	Q	R	V	I	E	V	L	S	R	.	.	R	T	K	N	N	P	V	L	I	G	E	P	G	V	G	K	T	A	I	A	E	G	L	A	Q	Q	I	I	N	N	E	.	.	.	.	.	.	.	.	.	.	V	P	E	I	L	R	D	K	R	V	M	T	L	E	D	R	L
Template Known Secondary structure		S																				.	.	S	S	S							S		T	T	T	T	T													S	S		.	.	.	.	.	.	.	.	.	.	S		T	T	T	S	S								T	T
Template Predicted Secondary structure																						.	.																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.											230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
			282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	K	K	G	F	F	E	Q	A	N	G	G	S	V	L	L	D	E	I	G	E	M	S	P	R	M	Q	A	K	L	L	R	F	L	N	D	G	T	F	R	R	V	G	E	D	H	E	V	H	V	D	V	R	V	I	C	A	T	Q	K	N	L	V	E	L	V	Q	K	G	M	F	R	E	D	L	Y	Y	R	L
Query Conservation		.
Alig confidence		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		K	K	V	M	D	E	I	R	Q	A	G	N	I	I	L	F	I	D	A	K	P	S	L	A	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	Q	C	I	G	A	T	T	L	D	E	Y	R	K	Y	I	E	K	.	.	D	A	A	L	E	R	R	F
Template Known Secondary structure										T														T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									T	T	T	T					T	T	.	.		S					S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.																										.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.
		361	.	.	.	.	.	.	.											.	370	.	.	.	.	.	.						.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.										410	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.									.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.									.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Query Sequence		N	V	L	T	L	N	L	P	.	.	.	.	.	.	.	.	.	.	P	L	R	D	C	P	Q	D	.	.	.	.	.	I	M	P	L	T	E	L	F	V	A	R	F	A	D	E	Q	G	V	P	R	P	K	L	A	A	D	L	N	T	V	L	T	R	.	.	.	.	.	.	.	.	.	Y	A	W	P	G	N	V
Query Conservation										.	.	.	.	.	.	.	.	.	.									.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.									.	.	.	.	.																						.												.	.	.	.	.	.	.	.	.
Template Conservation																																																						.
Template Sequence		Q	P	I	Q	V	D	Q	P	S	V	D	E	S	I	Q	I	L	Q	G	L	R	D	R	Y	E	A	H	H	R	V	S	I	T	D	D	A	I	E	A	A	V	K	L	S	D	R	Y	I	S	D	R	F	.	L	P	D	K	A	I	D	L	I	D	E	A	G	S	K	V	R	L	R	S	F	T	T	P	P	N	L
Template Known Secondary structure																					T	T	T	T	S	G	G	G	S	S		S																S	S			S		.	T	T																		T	T	S			S	S	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		417	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	L	K	N	A	I	Y	R	A	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	L	E	Q	K	L	D	E	V	R	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions