Job Description P07604 Confidence 98.72% Date Thu Jan 5 11:00:21 GMT 2012 Rank 130 Aligned Residues 122 % Identity 15% Template c3p7nB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:sensor histidine kinase; PDBTitle: crystal structure of light activated transcription factor el222 from2 erythrobacter litoralis Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.									.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.																																								.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.																																								.	.	.	.	.	.	.	.
Query Sequence		L	A	L	S	A	L	L	E	A	L	P	E	P	V	L	S	V	D	M	K	.	.	.	S	K	V	D	M	A	N	P	A	S	C	Q	L	F	G	Q	K	L	D	R	L	R	N	H	T	A	A	Q	L	I	N	G	F	N	F	L	R	W	L	.	.	.	.	.	.	.	.	E	S	E	P	Q	D	S	H	N	E
Query Conservation																						.	.	.																																								.	.	.	.	.	.	.	.
Alig confidence																						.	.	.																																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	W	V	L	D	L	I	E	A	S	P	I	A	S	V	V	S	D	P	R	L	A	D	N	P	L	I	A	I	N	Q	A	F	T	D	L	T	G	Y	S	E	E	E	C	V	G	R	N	C	R	F	L	A	G	S	G	T	E	P	W	L	T	D	K	I	R	Q	G	V	R	E	H	K	P	V	L	V	E	I	L
Template Known Secondary structure		S								T		S	S							T	T	S	T	T																						T	T	S		G	G	G	G	B		T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	V	I	N	G	Q	N	F	L	M	E	I	T	P	V	Y	L	Q	D	E	N	D	Q	H	V	L	T	G	A	V	V	M	L	R	S	T	I	R	M	G	R	Q	L	Q	N	V	A	A	Q	D	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Y	K	K	D	G	T	P	F	R	N	A	V	L	V	A	P	I	Y	D	D	D	D	E	L	L	Y	F	L	G	S	Q	V	E	V	G	M	A	R	R	E	R	A	A	E	M	L	K	T	L	S	P	R
Template Known Secondary structure					T	T	S															T	T	T	T																								T	T	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions