Job Description P07604 Confidence 98.45% Date Thu Jan 5 11:00:21 GMT 2012 Rank 141 Aligned Residues 105 % Identity 22% Template c3n70F_ PDB info PDB header:transport protein Chain: F: PDB Molecule:transport activator; PDBTitle: the crystal structure of the p-loop ntpase domain of the sigma-542 transport activator from e. coli to 2.8a Resolution 2.80 Å

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		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	K	M	K	H	V	V	E	Q	A	Q	K	L	A	M	L	S	A	P	L	L	I	T	G	D	T	G	T	G	K	D	L	F	A	Y	A	C	H	Q	A	S	P	R	A	G	K	P	Y	L	A	L	N	C	A	S	I	P	E	D	A	V	E	S	E	L	F	G	H	A	P	E	G	K	K	G	F	F	E	Q
Query Conservation
Alig confidence																.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	W	I	N	Q	Y	R	R	R	L	Q	Q	L	.	.	.	.	.	.	.	W	L	Y	G	A	P	G	T	G	R	X	T	G	A	R	Y	L	H	.	.	.	.	.	.	.	.	.	F	V	Y	R	E	L	T	P	D	N	A	P	Q	L	N	D	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T		.	.	.	.	.	.	.		B			S	S	S	T	T						T	T	T		.	.	.	.	.	.	.	.	.								T	T	T	S	T	T					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180										.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	G	G	S	V	L	L	D	E	I	G	E	M	S	P	R	M	Q	A	K	L	L	R	F	L	N	D	G	T	F	R	R	V	G	E	D	H	E	V	H	V	D	V	R	V	I	C	A	T	Q	K	N	L	V	E	L	V	Q	K	G	M	F	R	E	D	L	Y	Y	R	L	N	V	L	T	L	N	L	P	P
Query Conservation
Alig confidence		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	A	L	T	L	V	L	S	H	P	E	H	L	T	R	E	Q	Q	Y	H	L	V	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	D	T	S	L	V	E	L	A	A	S	N	H	I	I	A	E	L	Y	Y	C	F	A	X	T	Q	I	A	C	L	P
Template Known Secondary structure		.	.								S	G	G	G	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S												T			B
Template Predicted Secondary structure		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.																								.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions