Job Description P07604 Confidence 99.18% Date Thu Jan 5 11:00:21 GMT 2012 Rank 65 Aligned Residues 107 % Identity 13% Template c3mqoB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, luxr family; PDBTitle: the crystal structure of the pas domain in complex with isopropanol of2 a transcriptional regulator in the luxr family from burkholderia3 thailandensis to 1.7a Resolution 1.70 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.										140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.
Query Sequence		L	S	A	L	L	E	A	L	P	E	P	V	L	S	V	D	M	K	S	K	V	D	M	A	N	P	A	S	C	Q	L	F	G	Q	K	L	D	R	L	R	N	H	T	A	A	Q	L	I	N	G	F	N	F	L	R	W	L	E	.	.	.	.	.	.	.	.	.	S	E	P	Q	D	S	H	N	E	H	V	V	I
Query Conservation																																																												.	.	.	.	.	.	.	.	.
Alig confidence														.																																														.	.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		Y	K	T	A	F	H	L	A	P	I	G	L	.	V	L	S	R	D	R	V	I	E	D	C	N	D	E	L	A	A	I	F	R	C	A	R	A	D	L	I	G	R	S	F	E	V	L	Y	P	S	S	D	E	F	E	R	I	G	E	R	I	S	P	V	X	I	A	H	G	S	Y	A	D	D	R	I	X	K	R	A
Template Known Secondary structure										S	S			.					T	T													T	T	S						T	T			G	G	G	G	S	S																				S											T
Template Predicted Secondary structure														.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	Q	N	F	L	M	E	I	T	P	V	Y	L	Q	D	E	N	D	Q	H	V	L	T	G	A	V	V	M	L	R	S	T	I	R	M	G	R	Q	L
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		G	G	E	L	F	W	C	H	V	T	G	R	A	L	D	R	T	A	P	.	.	.	L	A	A	G	V	W	T	F	E	D	L	S	A	T	R	R	V	A
Template Known Secondary structure		T	S												S	S	T	T	S	T	.	.	.	T	S	S										S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions