Return to main results Retrieve Phyre Job Id

Job DescriptionP07604
Confidence88.57%DateThu Jan 5 11:00:21 GMT 2012
Rank436Aligned Residues40
% Identity20%Templatec3mkzU_
PDB info PDB header:dna-binding protein/dnaChain: U: PDB Molecule:protein sopb; PDBTitle: structure of sopb(155-272)-18mer complex, p21 form
Resolution2.98 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   467..470... ...... 480.........490.........500......
Predicted Secondary structure  ...








Query SS confidence 






.





. .


























Query Sequence  RFERSVL. TQLYRN. . YPSTRKLAKRLGVSHTAIANKLREYGL
Query Conservation    
   
.      .. 

   

  




 

 



   
Alig confidence 






.





..


























Template Conservation    
 
  
   
      

  

   
 


 


 


  
Template Sequence  AYERGQRYASRLQNEFAGNISALADAENISRKIITRCINTAKL
Template Known Secondary structure  TT
TTT

TS
Template Predicted Secondary structure 








Template SS confidence 










































   160.........170.........180.........190.........200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions