Job Description P07604 Confidence 97.73% Date Thu Jan 5 11:00:21 GMT 2012 Rank 160 Aligned Residues 173 % Identity 18% Template c3m6aC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:atp-dependent protease la 1; PDBTitle: crystal structure of bacillus subtilis lon c-terminal domain Resolution 3.40 Å

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		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	P	L	L	I	T	G	D	T	G	T	G	K	D	L	F	A	Y	A	C	H	Q	A	S	P	R	A	G	K	P	Y	L	A	L	N	C	A	S	I	P	E	D	A	V	E	S	E	L	F	G	H	A	P	E	G	K	K	G	F	F	E	Q	A	N	G	G	S	V	L	L	D	E	I	G	E	M	S	P	R
Query Conservation
Alig confidence																							.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	I	L	C	L	A	G	P	P	G	V	G	K	T	S	L	A	K	S	I	.	.	.	A	K	S	L	G	R	K	F	V	R	I	S	L	G	G	R	I	I	Q	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	A	G	K	L	N	P	V	F	L	L	D	E	I	D	K	M	S	A	M
Template Known Secondary structure		S							S	S	S	S	S	S									.	.	.					T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S	S	S								S	S	S
Template Predicted Secondary structure																							.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.				.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.															.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	A	K	L	L	R	F	L	N	D	G	T	F	R	R	V	G	E	D	H	E	V	H	V	D	V	R	V	I	C	A	T	Q	K	N	L	V	E	L	V	Q	K	G	M	F	R	E	D	L	Y	Y	R	L	N	V	L	T	L	N	L	P	P	L	R	D	C	P	Q	D	I	M	P	L	T	E	L	F	V	A
Query Conservation
Alig confidence				.	.																																		.	.	.	.	.	.														.	.									.
Template Conservation				.	.																																		.	.	.	.	.	.														.	.									.
Template Sequence		L	E	.	.	V	L	D	P	E	Q	N	S	S	F	S	D	H	Y	I	E	E	T	F	D	L	S	K	V	L	F	I	A	T	A	N	N	L	.	.	.	.	.	.	A	T	I	P	G	P	L	R	D	R	M	E	I	.	.	I	N	I	A	G	Y	T	E	.	I	E	K	L	E	I	V	K	D	H	L	L	P
Template Known Secondary structure		G	G	.	.	G	T		T	T	T	T	T	B				S	S	S					B		S	S								S	S	T	.	.	.	.	.	.	T	T	S											.	.									.										T
Template Predicted Secondary structure				.	.																																		.	.	.	.	.	.														.	.									.
Template SS confidence
		439	440			.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.							.	.	.	.	.	.	480	.	.	.	.	.	.			.	.	.	490	.	.	.	.		.	.	.	.	.	500	.	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400				.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		R	F	A	D	E	Q	G	V	P	R	P	K	L	A	.	.	.	A	D	L	N	T	V	L	T	R	Y	A	W	P	G	N	V	R	Q	L	K	N	A	I	Y	R	A	L
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		K	Q	I	K	E	H	G	L	K	K	S	N	L	Q	L	R	D	Q	A	I	L	D	I	I	R	Y	Y	T	R	E	A	G	V	R	S	L	E	R	Q	L	A	A	I	C
Template Known Secondary structure							T				G	G	G																			S	S	S
Template Predicted Secondary structure
Template SS confidence
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions