Job Description P07604 Confidence 99.19% Date Thu Jan 5 11:00:21 GMT 2012
Rank 63 Aligned Residues 109
% Identity 16% Template c3lyxA_
PDB info
PDB header: transcriptionChain: A: PDB Molecule: sensory box/ggdef domain protein;
PDBTitle: crystal structure of the pas domain of the protein cps_12912 from colwellia psychrerythraea. northeast structural3 genomics consortium target id csr222b
Resolution 2.00 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
78 . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . .
140 . . . . . . . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
E H L A L S A L L E A L P E P V L S V D M K S K V D M A N P A S C Q L F G Q K L D R L R N H T A A Q L I N G F N F L R W L E .
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S E P Q D S H N E H
Query Conservation  
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Alig confidence  
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Template Conservation  
                                                                                                                                           
Template Sequence  
I L K Q R A K A F D Y V F D A I V V T D L Q G F I I D W N K G S E T L Y G Y S K E Q A I G Q P V N M L H V P G D T E H I T S E V I S A V E N Q G K W T G E I R M
Template Known Secondary structure  
G G G T S S T T B T T S B G G G G S T T T T S
Template Predicted Secondary structure  
Template SS confidence  
   
5 . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . .
 
   
150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
V V I N G Q N F L M E I T P V Y L Q D E N D Q H V L T G A V V M L R S T I R M
Query Conservation  
                                                         
Alig confidence  
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Template Conservation  
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Template Sequence  
L H K D G H I G W I E S M C V P I Y G E N Y Q .
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M V G A L G I N R D I T K R
Template Known Secondary structure  
T T S S T T . . S
Template Predicted Secondary structure  
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Template SS confidence  
   
85 . . . . 90 . . . . . . . . . 100 . . . . . . .
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]