Job Description P07604 Confidence 99.47% Date Thu Jan 5 11:00:21 GMT 2012 Rank 36 Aligned Residues 210 % Identity 18% Template c3f9vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:minichromosome maintenance protein mcm; PDBTitle: crystal structure of a near full-length archaeal mcm: functional2 insights for an aaa+ hexameric helicase Resolution 4.35 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		M	L	S	A	P	L	L	I	T	G	D	T	G	T	G	K	D	L	F	A	Y	A	C	H	Q	A	S	P	R	A	G	K	P	Y	L	A	L	N	C	A	S	I	P	E	D	A	V	E	S	E	L	F	G	H	A	P	E	G	.	.	.	K	K	G	F	F	E	Q	A	N	G	G	S	V	L	L	D	E	I	G
Query Conservation																																																												.	.	.
Alig confidence																																.	.	.																										.	.	.
Template Conservation																																.	.	.
Template Sequence		R	G	D	I	H	I	L	I	I	G	D	P	G	T	A	K	S	Q	M	L	Q	F	I	S	R	V	A	P	R	A	.	.	.	V	Y	T	T	G	K	G	S	T	A	A	G	L	T	A	A	V	V	R	E	K	G	T	G	E	Y	Y	L	E	A	G	A	L	V	L	A	D	G	G	I	A	V	I	D	E	I	D
Template Known Secondary structure				S								S	S			T							S	S	S	T	T		S			.	.	.					T	T		S	T	T	T	T	S					S	S	G	G	G	T	S	S		S										S	S	S					T	T	T	T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360				.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340							.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																						.	.																				.	.	.	.	.	.
Query SS confidence																						.	.																				.	.	.	.	.	.
Query Sequence		E	M	S	P	R	M	Q	A	K	L	L	R	F	L	N	D	G	T	F	R	.	.	R	V	G	E	D	H	E	V	H	V	D	V	R	V	I	C	A	T	Q	.	.	.	.	.	.	K	N	L	V	E	L	V	Q	K	G	M	F	R	E	D	L	Y	Y	R	L	N	V	L	T	L	N	L	P	P	L	R	D	C
Query Conservation																						.	.																				.	.	.	.	.	.
Alig confidence																						.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		K	M	R	D	E	D	R	V	A	I	H	E	A	M	E	Q	Q	T	V	S	I	A	K	A	G	I	V	A	K	L	N	A	R	A	A	V	I	A	A	G	N	P	K	F	G	R	Y	I	S	E	R	P	V	S	D	N	I	N	L	P	P	T	I	L	S	R	F	D	L	I	F	I	L	K	D	Q	P	G	E	Q
Template Known Secondary structure					S												S	S	S					S	S	S	S																	T	T			S		T	T	S		S		T	T	T		S		S	S	S	G	G	G		S								T	T
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
		374	.	.	.	.	.	380																			.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410															.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	D	I	M	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	L	F	V	A	R	F	A	D	E	Q	G	V	P	R	P	K	L	A	A	D	L	N	T	V	L	T	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	W	P	G	N	V	R	Q	L	K	N
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.
Template Sequence		D	R	E	L	A	N	Y	I	L	D	V	H	S	G	K	S	T	K	N	I	I	D	I	D	T	L	R	K	Y	I	A	Y	A	R	K	Y	V	.	.	.	T	P	K	I	T	S	E	A	K	N	L	I	T	D	F	F	V	E	M	R	K	K	S	S	E	T	P	D	S	P	I	L	I	T	P	R	Q	L	E	A
Template Known Secondary structure											T	T	T				S	S	S	S	T	T			T	T	T												.	.	.								T									T	T	S	S		S			B		S	S	S		B		S	S	T	T	T	T	T
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.				.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		422	.	.	.	.	.	.	.	430	.				.	.	.	.	.	.	.	.	440
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		A	I	Y	R	A	L	T	Q	L	D	.	.	.	G	Y	E	L	R	P	Q	D	I
Query Conservation												.	.	.
Alig confidence												.	.	.
Template Conservation
Template Sequence		L	I	R	I	S	E	A	Y	A	K	M	A	L	K	A	E	V	T	R	E	D	A
Template Known Secondary structure												T	T	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions