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Job DescriptionP07604
Confidence99.47%DateThu Jan 5 11:00:21 GMT 2012
Rank36Aligned Residues210
% Identity18%Templatec3f9vA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:minichromosome maintenance protein mcm; PDBTitle: crystal structure of a near full-length archaeal mcm: functional2 insights for an aaa+ hexameric helicase
Resolution4.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   225....230.........240.........250.........260.........270.........280.. .......290.........300.
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Query Sequence  MLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELFGHAPEG. . . KKGFFEQANGGSVLLDEIG
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Template Sequence  RGDIHILIIGDPGTAKSQMLQFISRVAPRA. . . VYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEID
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   331........340.........350.........360 .........370.........380.........390.........400.......
 
   302.......310.........320. ........330.........340 .........350.........360.........370...
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Query Sequence  EMSPRMQAKLLRFLNDGTFR. . RVGEDHEVHVDVRVICATQ. . . . . . KNLVELVQKGMFREDLYYRLNVLTLNLPPLRDC
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Template Sequence  KMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQPGEQ
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   408.410.........420.........430.........440.........450.........460.........470.........480.......
 
   374.....380 .........390.........400.........410 .........420.
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Query Sequence  PQDIMPL. . . . . . . . . . . . . . . . . . TELFVARFADEQGVPRPKLAADLNTVLTRY. . . . . . . . . . . . . . AWPGNVRQLKN
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Template Sequence  DRELANYILDVHSGKSTKNIIDIDTLRKYIAYARKYV. . . TPKITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEA
Template Known Secondary structure  TTT


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   488.490.........500.........510.........520.... .....530.........540.........550.........560....
 
   422.......430. ........440
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Query Sequence  AIYRALTQLD. . . GYELRPQDI
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Template Sequence  LIRISEAYAKMALKAEVTREDA
Template Known Secondary structure  TTSS

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   565....570.........580......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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