Job Description P07604 Confidence 96.65% Date Thu Jan 5 11:00:21 GMT 2012 Rank 170 Aligned Residues 122 % Identity 9% Template c3cloC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator containing a2 luxr dna binding domain (np_811094.1) from bacteroides3 thetaiotaomicron vpi-5482 at 2.04 a resolution Resolution 2.04 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.									.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																										.																												.	.	.	.	.	.	.	.
Query SS confidence																										.																												.	.	.	.	.	.	.	.
Query Sequence		P	S	E	R	E	H	L	A	L	S	A	L	L	E	A	L	P	E	P	V	L	S	V	D	.	M	K	S	K	V	D	M	A	N	P	A	S	C	Q	L	F	G	Q	K	L	D	R	L	R	N	H	T	.	.	.	.	.	.	.	.	A	A	Q	L	I	N	G	F	N	F	L	R	W	L	E	S	E	P	Q	D
Query Conservation																										.																												.	.	.	.	.	.	.	.
Alig confidence																										.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	E	Q	H	Q	Q	F	V	R	S	L	T	E	V	N	G	G	C	A	V	I	S	D	L	S	N	R	K	S	Y	V	T	V	H	P	W	A	N	F	L	G	L	T	P	E	E	A	A	L	S	V	I	D	S	X	D	E	D	C	I	Y	R	R	I	H	P	E	D	L	V	E	K	R	L	X	E	Y	K	F
Template Known Secondary structure																		S								T	T	T	T								T	T		G	G	G												T	T				T					T	T	B
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		145																			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	E	H	V	V	I	N	G	Q	N	F	L	M	E	.	.	I	T	P	V	Y	L	Q	D	E	N	D	Q	H	V	L	T	G	A	V	V	M	L	R	S	T	I	R	M	G	R	Q	L	Q	N	V
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		F	Q	K	T	F	S	X	S	P	G	E	R	L	K	Y	R	G	R	C	R	L	R	X	X	N	E	K	G	V	Y	Q	Y	I	D	N	L	V	Q	I	X	Q	N	T	P	A	G	N	V	W	L	I	F	C	L	Y	S	L	S	A	D	Q	R	P	E	Q	G	I	Y	A	T	I
Template Known Secondary structure							T	S						T	T												T	T	S																T	T	S													S						S	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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