Job Description P07604 Confidence 99.22% Date Thu Jan 5 11:00:21 GMT 2012 Rank 56 Aligned Residues 216 % Identity 19% Template c3b9pA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin Resolution 2.70 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220											.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	D	V	S	A	F	S	Q	I	V	A	V	S	P	K	M	K	H	V	V	E	Q	A	.	.	.	.	.	.	.	.	.	.	Q	K	L	A	M	L	S	A	P	L	L	I	T	G	D	T	G	T	G	K	D	L	F	A	Y	A	C	H	Q	A	S	P	R	A	G	K	P	Y	L	A	L	N	C	A	S	I
Query Conservation																										.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		G	G	A	K	V	E	W	T	D	I	A	G	Q	D	V	A	K	Q	A	L	Q	E	M	V	I	L	P	S	V	R	P	E	L	F	T	G	L	R	A	P	A	K	G	L	L	L	F	G	P	P	G	N	G	K	T	L	L	A	R	A	V	A	T	E	.	.	.	C	S	A	T	F	L	N	I	S	A	A	S	L
Template Known Secondary structure			S	S				G	G	G	S														T							G	G	G	S		G	G	G				S						S	S	S	S	S													.	.	.	T	T								S	T	T	T
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.				540	.	.	.	.	.	.	.	.	.	550	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.							.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.														.	.	.	.	.	.
Query SS confidence																										.	.	.														.	.	.	.	.	.
Query Sequence		P	E	D	A	V	E	S	E	L	F	G	H	A	P	E	G	K	K	G	F	F	E	Q	A	.	.	.	N	G	G	S	V	L	L	D	E	I	G	E	M	.	.	.	.	.	.	S	P	R	M	Q	A	K	L	L	R	F	L	N	D	G	T	F	R	R	V	G	E	D	H	E	V	H	V	D	V	R	V	I	C
Query Conservation																										.	.	.														.	.	.	.	.	.
Alig confidence							.	.	.	.	.															.	.	.														.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	K	Y	V	.	.	.	.	.	G	D	G	E	K	L	V	R	A	L	F	A	V	A	R	H	M	Q	P	S	I	I	F	I	D	E	V	D	S	L	L	S	E	R	E	A	S	R	R	L	K	T	E	F	L	V	E	F	D	G	L	P	.	.	.	.	.	.	.	.	.	.	.	.	R	I	V	V	L	A
Template Known Secondary structure		S	S	S	S		.	.	.	.	.	S																T		S							T	G	G	G	T	S	B					S																.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		553	.	.	.	.						.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.													610	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		A	T	Q	K	N	L	V	E	L	V	Q	K	G	M	F	R	E	D	L	Y	Y	R	L	N	.	V	L	T	L	N	L	P	P	L	R	D	C	P	Q	D	I	M	P	L	T	E	L	F	V	A	R	F	A	D	E	Q	G	V	P	R	P	K	L	A	A	D	L	N	T	V	L	T	R	Y	A	W	P	G	N	V
Query Conservation																										.
Alig confidence						.	.	.	.	.	.	.														.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	N	R	.	.	.	.	.	.	.	P	Q	E	L	D	E	A	A	L	R	R	F	T	K	R	V	Y	V	S	L	P	D	E	Q	T	R	E	L	L	L	N	R	L	L	.	.	.	.	.	.	.	.	.	.	.	Q	K	Q	G	S	P	L	D	T	E	A	L	R	R	L	A	K	I	T	D	G	Y	S	G
Template Known Secondary structure				S		.	.	.	.	.	.	.	G	G	G	B																															.	.	.	.	.	.	.	.	.	.	.	G	G	G	S			S												T	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		627	.	.	630								.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.												.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430								.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.
Query Sequence		R	Q	L	K	N	A	I	Y	R	A	L	T	Q	L	.	.	.	.	.	.	.	D	G	Y	E	L	R	P	Q	D	I	L	L	P	D	Y	D	A	A	T	V
Query Conservation																.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	L	T	A	L	A	K	D	A	A	L	E	P	I	R	E	L	N	I	S	A	M	R	A	I	T	E	Q	D	F	H	S	S	L	K	R	I	R	R	S
Template Known Secondary structure												T	T					T																		T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions