Job Description P07604 Confidence 99.02% Date Thu Jan 5 11:00:21 GMT 2012 Rank 89 Aligned Residues 111 % Identity 14% Template c2pr6A_ PDB info PDB header:flavoprotein, signaling protein Chain: A: PDB Molecule:blue-light photoreceptor; PDBTitle: structural basis for light-dependent signaling in the dimeric lov2 photosensor ytva (light structure) Resolution 1.95 Å

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		86	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.									140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure														.	.	.																																											.	.	.	.	.	.	.	.
Query SS confidence														.	.	.																																											.	.	.	.	.	.	.	.
Query Sequence		L	E	A	L	P	E	P	V	L	S	V	D	.	.	.	M	K	S	K	V	D	M	A	N	P	A	S	C	Q	L	F	G	Q	K	L	D	R	L	R	N	H	T	A	A	Q	L	I	N	G	F	N	F	L	R	W	L	E	.	.	.	.	.	.	.	.	S	E	P	Q	D	S	H	N	E	H	V	V	I	N	G
Query Conservation														.	.	.																																											.	.	.	.	.	.	.	.
Alig confidence														.	.	.																																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	H	V	R	V	G	V	V	I	T	D	P	A	L	E	D	N	P	I	V	Y	V	N	Q	G	F	V	Q	M	T	G	Y	E	T	E	E	I	L	G	K	N	C	R	F	L	Q	G	K	H	T	D	P	A	E	V	D	N	I	R	T	A	L	Q	N	K	E	P	V	T	V	Q	I	Q	N	Y	K	K	D	G
Template Known Secondary structure														T	T	S	T	T															S			G	G	G	T	T	T	S		G	G	G	G			T	T															T	T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	F	L	M	E	I	T	P	V	Y	L	Q	D	E	N	D	Q	H	V	L	T	G	A	V	V	M	L	R	S	T	I	R	M	G	R	Q	L	Q	N	V	A	A	Q	D	V
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		T	M	F	W	N	E	L	N	I	D	P	M	E	I	E	D	.	.	.	.	K	T	Y	F	V	G	I	Q	N	D	I	T	K	Q	K	E	Y	E	K	L	L	E	D	S	L	T
Template Known Secondary structure																T	T	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions