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Job DescriptionP07604
Confidence99.01%DateThu Jan 5 11:00:21 GMT 2012
Rank92Aligned Residues153
% Identity16%Templatec2p65A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:hypothetical protein pf08_0063; PDBTitle: crystal structure of the first nucleotide binding domain of2 chaperone clpb1, putative, (pv089580) from plasmodium vivax
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   200.........210.........220.........230.........240.........250.........260.........270.........
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Query Sequence  VSAFSQIVAVSPKMKHVVEQAQKLAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELFGHA
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Template Sequence  AGKLDPVIGRDTEIRRAIQILSR. . RTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRKLVSLDLSSLIAGAKY
Template Known Secondary structure  TT
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   280.. .......290.........300... ......310.........320.........330.........340..
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Query Sequence  PEG. . . . . . . . KKGFFEQANGGSVLLDEIGEM. . . . . . . . . SPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKN
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Template Sequence  RGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLARGE. . . . . . . . . . . . . LRCIGATT. .
Template Known Secondary structure  TTTSTTGGGGSSSSSS
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   96...100.........110.........120.........130.........140.........150.. .......160
 
   343......350.........360.........
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Query Sequence  LVELVQKGMFREDLYYRLNVLTLNLPP
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Template Sequence  VSEYRQFIEKDKALERRFQQILVEQPS
Template Known Secondary structure  TTT


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   161........170.........180.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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