Job Description P07604 Confidence 99.71% Date Thu Jan 5 11:00:21 GMT 2012 Rank 20 Aligned Residues 204 % Identity 20% Template c2hcbC_ PDB info PDB header:replication Chain: C: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus Resolution 3.51 Å

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		198	.	200	.	.	.	.	.		.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure										.				.	.
Query SS confidence										.				.	.
Query Sequence		Q	D	V	S	A	F	S	Q	.	I	V	A	.	.	V	S	P	K	M	K	H	V	V	E	Q	A	Q	K	L	A	M	L	S	A	P	L	L	I	T	G	D	T	G	T	G	K	D	L	F	A	Y	A	C	H	Q	A	S	P	R	A	G	K	P	Y	L	A	L	N	C	A	S	I	P	E	D	A	V	E	S	E
Query Conservation										.				.	.
Alig confidence										.				.	.																																																										.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		N	P	K	Y	T	L	E	N	F	I	V	G	E	G	N	R	L	A	Y	E	V	V	K	E	A	L	E	N	L	G	S	L	Y	N	P	I	F	I	Y	G	S	V	G	T	G	K	T	H	L	L	Q	A	A	G	N	E	A	K	K	R	G	Y	R	V	I	Y	S	S	A	D	D	.	.	.	.	.	F	A	Q	A
Template Known Secondary structure			T	T			S	S	S	S				T	T	T										T	T	T	T	T	T	T	S									S	S	S	S	S															T	T											.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		L	F	G	H	A	P	E	G	K	K	G	F	F	E	Q	A	.	.	N	G	G	S	V	L	L	D	E	I	G	E	M	S	P	R	M	Q	A	K	L	L	R	F	L	N	D	G	T	F	R	R	V	G	E	D	H	E	V	H	V	D	V	R	V	I	C	A	T	Q	K	N	L	V	E	L	V	Q	K	G	M	F
Query Conservation																		.	.
Alig confidence																		.	.																																			.	.	.	.	.	.	.	.															.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.															.	.	.
Template Sequence		M	V	E	H	L	K	K	G	T	I	N	E	F	R	N	M	Y	K	S	V	D	L	L	L	L	D	D	V	Q	F	L	S	G	K	E	R	T	Q	I	E	F	F	H	I	F	N	T	L	Y	L	L	E	.	.	.	.	.	.	.	.	K	Q	I	I	L	A	S	D	R	H	P	Q	K	L	.	.	.	D	G	V
Template Known Secondary structure									T											T		S							G	G	G	G	T	T		S																T	T	.	.	.	.	.	.	.	.								S	S		G	G	G		.	.	.	T	T	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.									.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		R	E	D	L	Y	Y	R	L	N	V	L	T	L	N	L	.	.	P	P	L	R	D	C	P	Q	D	I	M	P	L	T	E	L	F	V	A	R	F	A	D	E	Q	G	V	P	R	P	K	L	A	A	D	L	N	T	V	L	T	R	Y	A	W	P	G	N	V	R	Q	L	K	N	A	I	Y	R	A	L	T	Q	L
Query Conservation																	.	.
Alig confidence																	.	.																	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		S	D	R	L	V	S	R	F	E	G	G	I	L	V	E	I	E	L	D	N	K	T	R	F	K	I	I	K	E	K	L	K	E	.	.	.	.	.	.	.	.	.	.	.	F	N	L	E	L	R	K	E	V	I	D	Y	L	L	E	N	.	.	T	K	N	V	R	E	I	E	G	K	I	K	L	I	K	L	K	G
Template Known Secondary structure												S									S														.	.	.	.	.	.	.	.	.	.	.	T	T															.	.			S												T	T	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.												.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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