Job Description P07604 Confidence 95.95% Date Thu Jan 5 11:00:21 GMT 2012 Rank 181 Aligned Residues 122 % Identity 15% Template c2gxaA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 with ssdna and mgadp Resolution 3.15 Å

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	M	K	H	V	V	E	Q	A	Q	K	L	A	M	L	S	A	P	L	L	I	T	G	D	T	G	T	G	K	D	L	F	A	Y	A	C	H	Q	A	S	P	R	A	G	K	P	Y	L	A	L	N	C	A	S	I	P	E	D	A	V	E	S	E	L	F	G	H	A	P	E	G	K	K	G	F	F	E	Q	A
Query Conservation
Alig confidence															.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	I	N	A	L	K	L	W	L	K	G	I	.	P	K	K	N	C	L	A	F	I	G	P	P	N	T	G	K	S	M	L	C	N	S	L	I	H	F	L	G	G	S	V	L	S	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	K	S	H	F	W	L	A	S	L	A
Template Known Secondary structure												T	T		.	T	T									S	S	S	S	S												T	T						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T	S		T	T	S	G	G	G
Template Predicted Secondary structure															.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.																				.	460	.	.	.	.	.	.	.	.	.	470
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.					.	.	.	.	350	.	.
Predicted Secondary structure																																			.	.	.																							.	.	.	.
Query SS confidence																																			.	.	.																							.	.	.	.
Query Sequence		N	G	G	S	V	L	L	D	E	I	G	E	M	S	P	R	M	Q	A	K	L	L	R	F	L	N	D	G	T	F	R	R	V	.	.	.	G	E	D	H	E	V	H	V	D	V	R	V	I	C	A	T	Q	K	N	L	V	E	.	.	.	.	L	V	Q	K	G	M	F
Query Conservation																																			.	.	.																							.	.	.	.
Alig confidence																																			.	.	.																							.	.	.	.
Template Conservation
Template Sequence		D	T	R	A	A	L	V	D	D	A	T	H	A	C	W	R	Y	F	D	T	Y	L	R	N	A	L	D	G	Y	P	V	S	I	D	R	K	H	K	A	A	V	Q	I	K	A	P	P	L	L	V	T	S	N	I	D	V	Q	A	E	D	R	Y	L	Y	L	H	S	R	V
Template Known Secondary structure		T		S						S												T	T						S	S							S	S	S															S	S		T	T	T		S	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions