Job Description P07604 Confidence 99.01% Date Thu Jan 5 11:00:21 GMT 2012 Rank 91 Aligned Residues 225 % Identity 10% Template c1fnnB_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																													.	.	.	.																								.
Query SS confidence																													.	.	.	.																								.
Query Sequence		Q	D	V	S	A	F	S	Q	I	V	A	V	S	P	K	M	K	H	V	V	E	Q	A	Q	K	L	A	.	.	.	.	M	L	S	A	P	L	L	I	T	G	D	T	G	T	G	K	D	L	F	A	Y	A	C	.	H	Q	A	S	P	R	A	G	K	P	Y	L	A	L	N	C	A	S	I	P	E	D	A	V	E
Query Conservation																													.	.	.	.																								.
Alig confidence																													.	.	.	.																								.
Template Conservation
Template Sequence		S	P	S	Y	V	P	K	R	L	P	H	R	E	Q	Q	L	Q	Q	L	D	I	L	L	G	N	W	L	R	N	P	G	H	H	Y	P	R	A	T	L	L	G	R	P	G	T	G	K	T	V	T	L	R	K	L	W	E	L	Y	K	D	K	T	T	A	R	F	V	Y	I	N	G	F	I	Y	R	N	F	T	A	I
Template Known Secondary structure		S	T	T				S			T	T																		S		B	S	S										T	T	S	S													T	T	S										T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.																	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	L	F	G	H	A	P	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	G	F	F	E	Q	A	N	G	G	S	V	L	L	D	E	I	G	E	M	S	P	R	M	Q	A	K	L	L	R	F	L	N	D	G	T	F	R	R	V	G	E	D	H	E	V	H	V	D	V	R	V	I
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.
Template Sequence		I	G	E	I	A	R	S	L	N	I	P	F	P	R	R	G	L	S	R	D	E	F	L	A	L	L	V	E	H	L	R	E	R	D	L	Y	M	F	L	V	L	D	D	A	F	N	L	A	P	D	I	L	S	T	F	I	R	L	G	Q	E	A	D	.	.	.	.	.	.	K	L	G	A	F	R	I	A	L	V	I
Template Known Secondary structure										T					S	S																		T	T									T	G	G	G	S												T	T				.	.	.	.	.	.			S	S	B
Template Predicted Secondary structure																																																																	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.							.	.	.	.	.	.	.	160	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.									.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.
Query Sequence		C	A	T	Q	K	N	L	V	E	L	V	Q	K	G	M	F	R	E	D	L	Y	Y	R	L	N	V	L	T	L	N	L	P	P	L	R	D	C	P	Q	D	I	M	P	L	T	E	L	F	V	A	R	F	A	D	E	Q	G	V	P	R	P	K	L	A	A	D	L	N	T	V	L	.	.	.	.	.	.	.	.	T
Query Conservation																																																																									.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.																							.	.	.	.	.	.																				.										.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.																							.	.	.	.	.	.																				.
Template Sequence		V	G	H	N	D	A	V	L	N	.	.	.	.	.	N	L	D	P	S	T	R	G	I	M	G	K	Y	V	I	R	F	S	P	Y	T	K	.	.	.	.	.	.	D	Q	I	F	D	I	L	L	D	R	A	K	A	G	L	A	E	G	S	.	Y	S	E	D	I	L	Q	M	I	A	D	I	T	G	A	Q	T	P
Template Known Secondary structure				S	S	T					.	.	.	.	.	T	S									T	T									B		.	.	.	.	.	.															B		T	T	S	.	S													S	B	S	S	T
Template Predicted Secondary structure											.	.	.	.	.																							.	.	.	.	.	.																				.
Template SS confidence
		164	.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430				.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		R	Y	A	W	P	G	N	V	R	Q	L	K	N	A	I	Y	R	A	L	T	Q	L	.	.	.	D	G	Y	E	L	R	P	Q	D	I
Query Conservation																								.	.	.
Alig confidence																								.	.	.
Template Conservation
Template Sequence		L	D	T	N	R	G	D	A	R	L	A	I	D	I	L	Y	R	S	A	Y	A	A	Q	Q	N	G	R	K	H	I	A	P	E	D	V
Template Known Secondary structure		T		T	T																					T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions