Job Description P0CF79 Confidence 97.55% Date Thu Jan 5 11:31:36 GMT 2012 Rank 23 Aligned Residues 142 % Identity 16% Template c2f7tA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:mos1 transposase; PDBTitle: crystal structure of the catalytic domain of mos1 mariner2 transposase Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.									.	.
Predicted Secondary structure																																																	.	.																						.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.																						.	.	.	.	.	.	.	.
Query Sequence		L	E	Q	D	F	Y	A	S	G	P	N	Q	K	W	A	G	D	I	T	Y	L	R	T	D	E	G	W	L	Y	L	A	V	V	I	D	L	W	S	R	A	V	I	G	W	S	M	S	.	.	P	R	M	T	A	Q	L	A	C	D	A	L	Q	M	A	L	W	R	R	K	R	.	.	.	.	.	.	.	.	P	R
Query Conservation																																																	.	.																						.	.	.	.	.	.	.	.
Alig confidence																																																	.	.																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	R	Y	K	R	K	S	F	L	H	R	I	V	T	G	D	E	K	W	I	F	F	V	N	P	K	K	T	M	L	C	V	W	W	D	Q	S	G	V	I	Y	Y	E	L	L	K	P	G	E	T	V	N	A	A	R	Y	Q	Q	Q	L	I	N	L	N	R	A	L	Q	R	K	R	P	E	Y	Q	K	R	Q	H
Template Known Secondary structure								S			G	G	G											B														T	T										T	T																												T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		N	V	I	V	H	T	D	R	G	G	Q	Y	C	S	A	D	Y	Q	A	Q	L	K	R	H	N	L	R	G	S	M	S	A	K	G	C	C	Y	D	N	A	C	V	E	.	S	F	F	H	S	L	K	V	E	C	I	H	G	E	H	F	I	S	R	E	I	M	R	A	T	V	F	N	Y	I	E
Query Conservation																																													.
Alig confidence																																									.				.										.
Template Conservation																																									.														.
Template Sequence		R	V	I	F	L	H	D	N	A	P	S	H	T	A	R	A	V	R	D	T	L	E	T	L	N	W	E	V	L	P	H	A	A	Y	S	P	D	L	A	.	P	S	D	Y	H	L	F	A	S	M	G	H	A	.	L	A	E	Q	R	F	D	S	Y	E	S	V	K	K	W	L	D	E	W	F	A
Template Known Secondary structure											G	G	G	G	S											T								T	T		G	G	G		.					T									.			T			B		S
Template Predicted Secondary structure																																									.														.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions