Job Description P75853 Confidence 86.38% Date Thu Jan 5 12:15:02 GMT 2012 Rank 153 Aligned Residues 211 % Identity 8% Template d2f34a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.74

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		28	.	30	.	.	.	.	.	.	.	.																			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.												.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	R	I	G	Y	Q	K	G	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	V	L	A	K	S	H	Q	L	L	E	K	R	Y	P	E	S	K	I	S	W	V	E	F	P	.	.	.	.	.	.	.	.	.	.	.	A	G	P	Q	M	L	E	A	L	N	V	G	S	I
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.
Template Sequence		T	L	I	V	T	T	I	L	E	E	P	Y	V	M	Y	R	K	S	D	K	P	L	Y	G	N	D	R	F	E	G	Y	C	L	D	L	L	K	E	L	S	N	I	L	.	.	G	F	L	Y	D	V	K	L	V	P	D	G	K	Y	G	A	Q	N	D	K	G	E	W	N	G	M	V	K	E	L	I	D	H	R	A
Template Known Secondary structure										B	T	T	T	B				S			S				G	G	G	G			S														.	.	T									T	T						B		T	T	S		B									T	T	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.							.	150	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.
Query Sequence		D	L	G	S	T	G	D	I	P	P	I	F	A	Q	A	A	G	A	D	L	V	Y	V	G	V	E	P	P	K	P	K	A	E	V	I	L	V	A	E	N	S	P	I	K	T	V	A	D	L	K	G	H	K	V	A	F	Q	K	G	S	S	S	H	N	L	L	L	R	A	L	.	.	.	.	.	.	R	Q	A	G
Query Conservation																																																																								.	.	.	.	.	.
Alig confidence																		.	.	.	.																																																			.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		D	L	A	V	A	P	L	T	I	T	Y	V	R	E	K	V	.	.	.	.	I	D	F	S	K	P	F	M	T	L	G	I	S	I	L	Y	R	K	P	I	D	S	A	D	D	L	A	K	Q	T	K	I	E	Y	G	A	V	R	D	G	S	T	M	T	F	F	K	K	S	K	I	S	T	Y	E	K	M	W	A	F
Template Known Secondary structure		S				S	S		B							T	T	.	.	.	.					S		S															S						T		S	S	S					B	T	T	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	F	T	D	I	Q	P	T	Y	L	T	P	A	D	A	R	A	A	F	Q	Q	G	N	V	D	A	W	A	I	W	D	P	Y	Y	S	A	A	L	L	Q	G	G	V	R	V	L	K	D	G	T	D	L	N	Q	T	G	S	F	Y	L	A	A	R	P	Y	A	E	K	N	G	A	F	I	Q	G	V	L	A	T
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.						.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.						.	.	.	.
Template Sequence		M	S	S	R	Q	Q	S	A	L	V	K	N	S	D	E	G	I	Q	R	V	L	T	T	D	Y	A	L	L	M	E	S	T	S	I	E	Y	V	T	Q	R	N	C	N	L	T	Q	I	G	G	L	I	D	S	K	G	Y	G	V	G	T	.	.	.	.	.	.	.	P	I	G	S	P	.	.	.	.	Y	R	D	K
Template Known Secondary structure					T					S	B	S	S											S	S																		T	T					S	S		S	S									.	.	.	.	.	.	.		T	T		T	.	.	.	.	T
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.						.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220								.	.	.	.	.					.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	E	A	D	A	L	T	R	S	Q	R	E	Q	S	I	A	L	L	A	K	T	M	G
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		I	T	I	A	I	L	Q	L	Q	E	E	.	G	K	L	H	M	M	K	E	K	W	W	R
Template Known Secondary structure												T	.	T
Template Predicted Secondary structure													.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions