Job Description P75853 Confidence 99.96% Date Thu Jan 5 12:15:02 GMT 2012 Rank 15 Aligned Residues 251 % Identity 14% Template d1zbma1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.30

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		28	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		A	L	R	I	G	Y	Q	K	.	.	G	S	I	G	M	V	L	A	K	S	H	Q	L	L	E	K	R	Y	P	E	S	K	I	S	W	V	E	F	P	A	G	P	Q	M	L	E	A	L	N	V	G	S	I	D	L	G	S	T	G	D	I	P	P	I	F	A	Q	A	A	G	A	D	L	V	Y	V	G	V	E	P
Query Conservation										.	.
Alig confidence										.	.																	.	.	.							.
Template Conservation																												.	.	.							.
Template Sequence		K	I	R	V	A	H	T	P	D	A	D	D	A	F	X	F	Y	A	X	T	H	G	K	V	D	T	.	.	.	W	L	E	I	E	H	.	V	I	E	D	I	E	T	L	N	R	K	A	F	N	A	E	Y	E	V	T	A	I	S	A	H	A	Y	A	L	L	D	D	K	Y	R	I	L	S	A	G	A	S	V	G
Template Known Secondary structure									S	S												T	T		S			.	.	.	S						.												G	G	G	T			S										T	T	S	T	T	T					S	S
Template Predicted Secondary structure																												.	.	.							.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	P	K	A	E	V	I	L	V	A	E	N	S	P	I	K	T	V	A	D	L	K	G	H	K	V	A	F	Q	K	G	S	S	S	H	N	L	L	L	R	A	L	R	Q	A	G	L	K	F	T	D	I	Q	P	T	Y	L	T	P	A	D	A	R	A	A	F	Q	Q	G	N	V	D	A	W	A	I	W	D	P
Query Conservation
Alig confidence											.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Sequence		D	G	Y	G	P	V	V	V	A	.	.	.	.	.	.	.	K	S	E	I	S	L	D	G	K	R	I	A	V	P	G	R	Y	T	T	A	N	L	L	L	K	L	A	V	E	.	.	.	.	.	.	D	F	E	P	V	E	X	P	F	D	R	I	I	Q	A	V	L	D	E	E	V	D	A	G	L	L	I	H	E
Template Known Secondary structure		S	S								.	.	.	.	.	.	.	S	S					T	T						S		T	T	S											S	.	.	.	.	.	.	S								G	G	G							T	T	S	S	S						S	G
Template Predicted Secondary structure											.	.	.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.								.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.							.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.
Predicted Secondary structure																				.	.	.	.	.	.																																																					.
Query SS confidence																				.	.	.	.	.	.																																																					.
Query Sequence		Y	Y	S	A	A	L	L	Q	G	G	V	R	V	L	K	D	G	T	.	.	.	.	.	.	D	L	N	Q	T	G	S	F	Y	L	A	A	R	P	Y	A	E	K	N	G	A	F	I	Q	G	V	L	A	T	F	S	E	A	D	A	L	T	R	S	Q	R	E	Q	S	I	A	L	L	A	K	T	M	.	G	L	P
Query Conservation																				.	.	.	.	.	.																																																					.
Alig confidence																				.	.	.	.	.	.																.	.	.																																			.
Template Conservation																																									.	.	.
Template Sequence		G	Q	I	T	Y	A	D	Y	G	L	K	C	V	L	D	L	W	D	W	W	S	E	Q	V	K	L	P	L	P	L	G	L	N	A	I	R	R	D	L	.	.	.	S	V	E	V	Q	E	E	F	L	R	A	X	R	E	S	I	A	F	A	I	E	N	P	D	E	A	I	E	Y	A	X	K	Y	S	R	G	L	D
Template Known Secondary structure		G	G	G	T	G	G	G	G	T													T	T		S	S											T	T	S	.	.	.																						S									G	G	G		T	T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	V	I	A	S	Y	L	D	H	R	P	P	T	T	I	K	P	V	N	A	E	V	A	A	L	Q	Q	Q	T	A	D	L	F	Y	E	N	R	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	R	A	K	R	F	A	X	X	Y	V	N	D	Y	T	Y	N	X	P	E	S	V	D	A	A	L	K	K	L	Y	E	X	A	E	A	K	G	L	I
Template Known Secondary structure													S	S					S																		T	T	T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions