Job Description P75853 Confidence 98.03% Date Thu Jan 5 12:15:02 GMT 2012 Rank 74 Aligned Residues 211 % Identity 16% Template d1wdna_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.94

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.												.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	R	I	G	Y	Q	K	G	S	I	G	M	V	.	.	.	.	.	.	.	.	.	.	.	L	A	K	S	H	Q	L	L	E	K	R	Y	P	E	S	K	I	S	W	V	E	F	P	A	G	P	Q	M	L	E	A	L	N	V	G	S	I	D	L	G	S	T	G	D	I	P	P	I	F	A	Q	A	A	G	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.												.	.												.
Template Conservation																																						.	.												.
Template Sequence		K	L	V	V	A	T	D	T	A	F	V	P	F	E	F	K	Q	G	D	L	Y	V	G	F	D	V	D	L	W	A	A	I	A	K	E	L	.	.	K	L	D	Y	E	L	K	P	M	D	F	.	S	G	I	I	P	A	L	Q	T	K	N	V	D	L	A	L	A	G	I	T	I	T	D	E	R	K	K	A	I	D
Template Known Secondary structure									S	S	B	T	T	T	B				T	T				S														.	.	T										G	.	G	G							T	T	S	S	S														T	T	S
Template Predicted Secondary structure																																						.	.												.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	V	Y	V	G	V	E	P	P	K	P	K	A	E	V	I	L	V	A	E	N	S	P	I	K	T	V	A	D	L	K	G	H	K	V	A	F	Q	K	G	S	S	S	H	N	L	L	L	R	A	L	R	Q	A	G	L	K	F	T	D	I	Q	P	T	Y	L	T	P	A	D	A	R	A	A	F	Q	Q	G	N
Query Conservation
Alig confidence										.	.	.	.																																										.	.	.	.	.	.
Template Conservation										.	.	.	.																																										.	.	.	.	.	.
Template Sequence		F	S	D	G	Y	Y	K	S	.	.	.	.	G	L	L	V	M	V	K	A	N	N	N	D	V	K	S	V	K	D	L	D	G	K	V	V	A	V	K	S	G	T	G	S	V	D	Y	A	K	A	N	I	K	.	.	.	.	.	.	T	K	D	L	R	Q	F	P	N	I	D	N	A	Y	M	E	L	G	T	N	R
Template Known Secondary structure				S						.	.	.	.								T	T			S		S	S	S	T	T	T	T	T							T	T	S												.	.	.	.	.	.		S						S	S										T	T	S
Template Predicted Secondary structure										.	.	.	.																																										.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	A	W	A	I	W	D	P	Y	Y	S	A	A	L	L	Q	G	G	V	R	V	L	K	D	G	T	D	L	N	Q	T	G	S	F	Y	L	A	A	R	P	Y	A	E	K	N	G	A	F	I	Q	G	V	L	A	T	F	S	E	A	D	A	L	T	R	S	Q	R	E	Q	S	I	A	L	L	A	K	T	M	G
Query Conservation
Alig confidence																																											.	.	.					.	.	.	.																.
Template Conservation																																											.	.	.					.	.	.	.																.
Template Sequence		A	D	A	V	L	H	D	T	P	N	I	L	Y	F	I	K	T	A	G	N	G	Q	F	K	A	V	G	D	S	L	E	A	Q	Q	Y	G	I	A	F	P	K	.	.	.	G	S	D	E	.	.	.	.	L	R	D	K	V	N	G	A	L	K	T	L	R	E	N	.	G	T	Y	N	E	I	Y	K	K	W	F	G
Template Known Secondary structure			S															T	T	T	T	T	T																			T	.	.	.	T				.	.	.	.															T	.	S											S
Template Predicted Secondary structure																																											.	.	.					.	.	.	.																.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.
		257	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	P
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		223	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions