Job Description P75853 Confidence 95.32% Date Thu Jan 5 12:15:02 GMT 2012 Rank 131 Aligned Residues 207 % Identity 11% Template d1sbpa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																.	.								.																.
Query SS confidence																																.	.								.																.
Query Sequence		S	P	E	A	L	R	I	G	Y	Q	K	G	S	I	G	M	V	L	A	K	S	H	Q	L	L	E	K	R	Y	P	.	.	E	S	K	I	S	W	V	.	E	F	P	A	G	P	Q	M	L	E	A	L	N	V	G	.	S	I	D	L	G	S	T	G	D	I	P	P	I	F	A	Q	A	A	G	A	D	L	V	Y
Query Conservation																																.	.								.																.
Alig confidence																																.	.								.																.
Template Conservation
Template Sequence		K	D	I	Q	L	L	N	V	S	Y	D	P	T	R	E	L	Y	E	Q	Y	N	K	A	F	S	A	H	W	K	Q	E	T	G	D	N	V	V	I	D	Q	S	H	G	G	S	G	K	Q	A	T	S	V	I	N	G	I	E	A	D	T	V	T	L	A	L	A	Y	D	V	N	A	I	A	E	R	G	R	I	D	K
Template Known Secondary structure												S	T	T																				S										S											T	T				S					S	S										T	T	S	S		T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		101	.	.	.	.	.	.							.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure									.	.	.	.	.	.														.	.								.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.														.	.								.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	V	E	P	P	K	.	.	.	.	.	.	P	K	A	E	V	I	L	V	A	E	N	S	P	.	.	I	K	T	V	A	D	L	.	.	.	.	K	G	H	K	V	A	F	Q	K	G	S	S	S	H	N	L	L	L	R	A	L	R	Q	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation									.	.	.	.	.	.														.	.								.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.														.	.								.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	W	I	K	R	L	P	D	D	S	A	P	Y	T	S	T	I	V	F	L	V	R	K	G	N	P	K	Q	I	H	D	W	N	D	L	I	K	P	G	V	S	V	I	T	P	N	P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L	H	H	N	N	N	D	Q	A	K	A	E	D	F	V	K
Template Known Secondary structure		T	G	G	G	G	S						S			B								T	T		T	T				S	G	G	G	G	G	S	T	T								T	T	T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
			153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure		.																																											.	.	.																								.
Query SS confidence		.																																											.	.	.																								.
Query Sequence		.	L	K	F	T	D	I	Q	P	T	Y	L	T	P	A	D	A	R	A	A	F	Q	Q	G	N	V	D	A	W	A	I	W	D	P	Y	Y	S	A	A	L	L	Q	G	.	.	.	G	V	R	V	L	K	D	G	T	D	L	N	Q	T	G	S	F	Y	L	A	A	R	P	.	Y	A	E	K	N	G	A	F	I	Q
Query Conservation		.																																											.	.	.																								.
Alig confidence		.																																											.	.	.																								.
Template Conservation
Template Sequence		A	L	F	K	N	V	E	V	L	D	S	G	A	R	G	S	T	N	T	F	V	E	R	G	I	G	D	V	L	I	A	W	E	N	E	A	L	L	A	T	N	E	L	G	K	D	K	F	E	I	V	T	P	S	E	S	I	L	A	E	P	T	V	S	V	V	D	K	V	V	E	K	K	D	T	K	A	V	A	E
Template Known Secondary structure						T						S	S										T	S				S															T	T	T	T	T	T							S					B															T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		228	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions