Job Description P75853 Confidence 98.49% Date Thu Jan 5 12:15:02 GMT 2012 Rank 54 Aligned Residues 179 % Identity 17% Template d1ryoa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 1.20

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.								.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.
Query Sequence		P	E	S	K	I	S	W	V	E	F	P	A	G	P	Q	M	L	E	A	L	N	V	G	S	I	D	L	G	S	T	G	D	I	P	P	I	F	A	Q	A	A	G	A	D	L	V	Y	V	G	V	E	P	.	.	.	.	.	.	.	P	K	P	K	A	E	V	I	L	V	A	E	N	S	P	I	K	T	V	A	D
Query Conservation																																																						.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.																	.
Template Conservation																																																																													.
Template Sequence		D	G	P	S	V	A	C	V	K	K	A	S	Y	L	D	C	I	R	A	I	A	A	N	E	A	D	A	V	T	L	D	A	G	L	V	Y	D	A	Y	L	A	P	N	N	L	K	P	V	V	A	E	F	Y	G	S	K	E	D	P	Q	T	F	Y	Y	A	V	A	V	V	K	K	D	S	G	F	.	Q	M	N	Q
Template Known Secondary structure		T	S									S	S										T	T	S			B													S	T	T	T													S	S	S			S										T	T				.		G	G	G
Template Predicted Secondary structure																																																																													.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.
		127	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.																																					.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	G	H	K	V	A	F	Q	.	.	K	G	S	S	S	H	N	L	L	L	R	A	L	R	Q	A	G	L	K	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	Q	P	T	Y	L	T	P	A	D	A
Query Conservation											.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	G	K	K	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	I	G	L	L	Y	C	D	L	P	E	P	R	K	P	L	E	K	A	V	A	N	F	F	S	G	S	C	A	P	C	A	D	G	T	D	F	P	Q	L	C	Q	L	C	P	G	C	G	C	S	T	L	N	Q	Y	F	G	Y	S	G	A
Template Known Secondary structure			T	T						S		T	T		T	T	T	T								G	G	G	S		S				S									S	S	S				T	T	S		T	T	T		G	G	G	G	T	T	S	T	T			S	S	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.													.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																							.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	A	F	Q	Q	G	N	V	D	A	W	A	I	W	D	P	Y	Y	S	A	.	.	.	.	A	L	L	Q	G	G	V	R	V	L	K	D	G	T	D	.	.	.	.	.	.	.	.	.	.	.	.	L	N	Q	T	G	S	F	Y	L	A	A	R	P	Y	A	E	K	N	G	A	F	I	Q	G	V	L	A	T
Query Conservation																							.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																																																		.	.
Template Sequence		F	K	C	L	K	D	G	A	G	D	V	A	F	V	K	H	S	T	I	F	E	N	L	A	N	K	A	D	R	D	Q	Y	E	L	L	C	L	D	N	T	R	K	P	V	D	E	Y	K	D	C	H	L	A	Q	V	P	S	H	T	V	V	A	R	S	.	.	M	G	G	K	E	D	L	I	W	E	L	L	N	Q
Template Known Secondary structure							T	T	S		S						T	T								S					T	T						T	T	S					G	G	G	G	G	G	S		S												S	.	.	S	S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.
		233	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions