Job Description P75853 Confidence 97.57% Date Thu Jan 5 12:15:02 GMT 2012 Rank 90 Aligned Residues 132 % Identity 14% Template d1dota1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.35

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	S	P	E	A	L	R	I	G	Y	Q	K	G	S	I	G	M	V	L	A	K	S	H	Q	L	L	E	K	R	Y	P	E	S	K	I	S	W	V	E	F	P	A	G	P	Q	M	L	E	A	L	N	V	G	S	I	D	L	G	S	T	G	D	I	P	P	I	F	A	Q	A	A	G	A	D	L	V	Y	V	G
Query Conservation
Alig confidence																																.	.
Template Conservation																																.	.
Template Sequence		A	P	P	K	T	T	V	R	W	C	T	I	S	S	A	E	E	K	K	C	N	S	L	K	D	H	M	Q	Q	E	.	.	R	V	T	L	S	C	V	Q	K	A	T	Y	L	D	C	I	K	A	I	S	N	N	E	A	D	A	I	S	L	D	G	G	Q	V	F	E	A	G	L	A	P	Y	K	L	K	P	I	A
Template Known Secondary structure													S	S	T	T									T	T	T	T	T	T	S	.	.	S	S								S	S										T	T	T			B												T	S	T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.																											.	.
Query SS confidence									.	.	.	.	.	.	.																											.	.
Query Sequence		V	E	P	P	K	P	K	.	.	.	.	.	.	.	A	E	V	I	L	V	A	E	N	S	P	I	K	T	V	A	D	L	K	G	H	K	V	A	F	Q	.	.	K	G	S	S	S	H	N	L	L	L	R	A	L	R	Q	A	G	L	K	F	T	D
Query Conservation									.	.	.	.	.	.	.																											.	.
Alig confidence									.	.	.	.	.	.	.														.													.	.
Template Conservation																													.
Template Sequence		A	E	V	Y	E	R	S	G	G	S	T	T	S	Y	Y	A	V	A	V	V	K	K	G	T	D	F	M	.	I	K	D	L	R	G	K	T	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	I	G	T	L	I	H	R	E	D	I	E	W	E
Template Known Secondary structure							S	S	S				S										T	T					.	G	G	G		T	T						S		S	S		T	T	T	T											S	S	S
Template Predicted Secondary structure																													.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions