Return to main results Retrieve Phyre Job Id

Job DescriptionP75853
Confidence96.68%DateThu Jan 5 12:15:02 GMT 2012
Rank115Aligned Residues82
% Identity18%Templated1b1xa2
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Transferrin
Resolution2.62

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.........80.........90.........100......... 110.........120.
Predicted Secondary structure 






















...............





Query SS confidence 




















































. . . . . . . . . . . . . . .











Query Sequence  KISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPK. . . . . . . . . . . . . . . AEVILVAENSPI
Query Conservation   

            

  
  
               
     
        ...............   


   
 
Alig confidence 




































..













...............











Template Conservation   
 

   
   

  
  
 

   

    
 
  ..  
 

  
 
                 
  





 
  
Template Sequence  KVACASASTTEECIALVLKGEADALNLDGGFIYVAGK. . CGLVPVLAENQKSQNSNAPDCVHRPPEGYLAVAVVRKSDAD
Template Known Secondary structure  SSSTS

B
..TT
S
SS

SGGGGGS



SS

S
Template Predicted Secondary structure 












..

























Template SS confidence 















































































   368.370.........380.........390.........400.... .....410.........420.........430.........440.....
 
   122.......130.........140
Predicted Secondary structure 












Query SS confidence 


















Query Sequence  KTVADLKGHKVAFQKGSSS
Query Conservation      




 
        
Alig confidence 


















Template Conservation       









   
Template Sequence  LTWNSLSGKKSCHTGVGRT
Template Known Secondary structure 

GGG
TT

S
TT
T
Template Predicted Secondary structure 












Template SS confidence 


















   446...450.........460....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions