Job Description P75853 Confidence 98.31% Date Thu Jan 5 12:15:02 GMT 2012 Rank 64 Aligned Residues 214 % Identity 18% Template c3h7mA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of a histidine kinase sensor domain with2 similarity to periplasmic binding proteins Resolution 2.40 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.													.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	P	E	A	L	R	I	G	Y	Q	K	G	S	I	G	M	V	.	.	.	.	.	.	.	.	.	.	.	.	L	A	K	S	H	Q	L	L	E	K	R	Y	P	E	S	K	I	S	W	V	E	F	P	A	G	P	Q	M	L	E	A	L	N	V	G	S	I	D	L	G	S	T	G	D	I	P	P	I	F	A
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.												.	.												.																							.	.	.
Template Conservation																																											.	.												.																							.	.	.
Template Sequence		D	R	H	R	T	I	V	V	G	G	D	R	D	Y	P	P	Y	E	F	I	D	Q	N	G	K	P	A	G	Y	N	V	E	L	T	R	A	I	A	E	V	M	.	.	G	M	T	V	E	F	R	L	G	A	W	.	S	E	M	F	S	A	L	K	S	G	R	V	D	V	L	Q	G	I	S	W	S	E	.	.	.
Template Known Secondary structure			S	S	S								T			T	T	T					T	T	S				S														.	.	T										G	.	G	G							T	T	S	S	S										.	.	.
Template Predicted Secondary structure																																											.	.												.																							.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	A	G	A	D	L	V	Y	V	G	V	E	P	P	K	P	K	A	E	V	I	L	V	A	E	N	S	P	I	K	T	V	A	D	L	K	G	H	K	V	A	F	Q	K	G	S	S	S	H	N	L	L	L	R	A	L	R	Q	A	G	L	K	F	T	D	I	Q	P	T	Y	L	T	P	A	D	A	R	A	A
Query Conservation
Alig confidence		.	.																																																									.	.	.	.	.	.
Template Conservation		.	.																																																									.	.	.	.	.	.
Template Sequence		.	.	K	R	A	R	Q	I	D	F	T	P	P	H	T	I	V	Y	H	A	I	F	A	R	R	D	S	P	P	A	A	G	L	E	D	L	R	G	R	K	V	A	L	H	R	D	G	I	M	H	E	Y	L	A	E	R	G	Y	.	.	.	.	.	.	G	K	D	L	V	L	T	P	T	P	A	D	A	L	R	L
Template Known Secondary structure		.	.				T	T																		S	S	S				S	S	G	G	G	G	T	T	S						T	T	S								T	T	T		.	.	.	.	.	.	G	G	G					S	S
Template Predicted Secondary structure		.	.																																																									.	.	.	.	.	.
Template SS confidence
				127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	Q	G	N	V	D	A	W	A	I	W	D	P	Y	Y	S	A	A	L	L	Q	G	G	V	R	V	L	K	D	G	T	D	L	N	Q	T	G	S	F	Y	L	A	A	R	P	Y	A	E	K	N	G	A	F	I	Q	G	V	L	A	T	F	S	E	A	D	A	L	T	R	S	Q	R	E	Q	S	I	A	L	L
Query Conservation
Alig confidence																																																.	.	.					.	.	.	.																.
Template Conservation																																																.	.	.					.	.	.	.																.
Template Sequence		L	A	A	G	G	C	D	Y	A	V	V	A	M	V	P	G	M	Y	I	I	R	E	N	R	L	T	N	L	V	P	V	A	R	S	I	A	A	Q	R	Y	G	Y	A	V	R	Q	.	.	.	G	D	A	E	.	.	.	.	L	L	A	R	F	S	E	G	L	A	I	L	R	K	T	.	G	Q	Y	E	A	I	R
Template Known Secondary structure				T	T	S	S	S																T	T		T	T																			T	.	.	.	T				.	.	.	.																.	T
Template Predicted Secondary structure																																																.	.	.					.	.	.	.																.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.				.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270
		252	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	T	M	G	L	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	W	L	G	V	L	E
Template Known Secondary structure				S	T	T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions