Job Description P75853 Confidence 98.01% Date Thu Jan 5 12:15:02 GMT 2012 Rank 75 Aligned Residues 213 % Identity 16% Template c3g41A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:amino acid abc transporter, periplasmic amino acid-binding PDBTitle: the structure of cpn0482, the arginine binding protein from the2 periplasm of chlamydia pneumoniae Resolution 2.10 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.													.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	P	E	A	L	R	I	G	Y	Q	K	G	S	I	G	M	V	.	.	.	.	.	.	.	.	.	.	.	.	L	A	K	S	H	Q	L	L	E	K	R	Y	P	E	S	K	I	S	W	V	E	F	P	A	G	P	Q	M	L	E	A	L	N	V	G	S	I	D	L	G	S	T	G	D	I	P	P	I	F	A
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.												.	.										.
Template Conservation																																											.	.										.
Template Sequence		D	R	N	R	I	W	I	V	G	T	N	A	T	Y	P	P	F	E	Y	V	D	A	Q	G	E	V	V	G	F	D	I	D	L	A	K	A	I	S	E	K	L	.	.	G	K	Q	L	E	V	R	E	F	.	A	F	D	A	L	I	L	N	L	K	K	H	R	I	D	A	I	L	A	G	M	S	I	T	P	S	R
Template Known Secondary structure													S		B	T	T	T	B				T	T	S				S														.	.	T									.		G	G	G							T	T	S	S	S				S			B
Template Predicted Secondary structure																																											.	.										.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	A	G	A	D	L	V	Y	V	G	V	E	P	P	K	P	K	A	E	V	I	L	V	A	E	N	S	P	I	K	T	V	A	D	L	K	G	H	K	V	A	F	Q	K	G	S	S	S	H	N	L	L	L	R	A	L	R	Q	A	G	L	K	F	T	D	I	Q	P	T	Y	L	T	P	A	D	A	R	A	A
Query Conservation
Alig confidence												.	.	.																																											.	.	.	.	.	.	.
Template Conservation												.	.	.																																											.	.	.	.	.	.	.
Template Sequence		Q	K	E	I	A	L	L	P	Y	Y	.	.	.	G	D	E	V	Q	E	L	M	V	V	S	K	R	S	L	E	T	P	V	L	P	L	T	Q	Y	S	S	V	A	V	Q	T	G	T	Y	Q	E	H	Y	L	L	S	.	.	.	.	.	.	.	Q	P	G	I	C	V	R	S	F	D	S	T	L	E	V	I	M	E
Template Known Secondary structure			T	T	S							.	.	.				B									T	T			S		S			G	G	G	S	S						T	T	S								T	.	.	.	.	.	.	.	S	T	T							S
Template Predicted Secondary structure												.	.	.																																											.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		F	Q	Q	G	N	V	D	A	W	A	I	W	D	P	Y	Y	S	A	A	L	L	Q	G	G	.	.	.	V	R	V	L	K	D	G	T	D	L	N	Q	T	G	S	F	Y	L	A	A	R	P	Y	A	E	K	N	G	A	F	I	Q	G	V	L	A	T	F	S	E	A	D	A	L	T	R	S	Q	R	E	Q	S	I
Query Conservation																										.	.	.
Alig confidence																										.	.	.																					.	.	.	.						.	.	.	.																.
Template Conservation																																																	.	.	.	.						.	.	.	.																.
Template Sequence		V	R	Y	G	K	S	P	V	A	V	L	E	P	S	V	G	R	V	V	L	K	D	F	P	N	L	V	A	T	R	L	E	L	P	P	E	C	W	V	L	G	C	G	L	G	V	A	.	.	.	.	K	D	R	P	E	.	.	.	.	E	I	Q	T	I	Q	Q	A	I	T	D	L	K	S	E	.	G	V	I	Q
Template Known Secondary structure				T	T	S	S	S													G	G	G		T	T										G	G	G		B									.	.	.	.	T	T				.	.	.	.															T	.	T
Template Predicted Secondary structure																																																	.	.	.	.						.	.	.	.																.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.
		249	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	A	K	T	M	G	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	T	K	K	W	Q	L	S	E
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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