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Job DescriptionP75853
Confidence31.94%DateThu Jan 5 12:15:02 GMT 2012
Rank208Aligned Residues227
% Identity8%Templatec3fzjC_
PDB info PDB header:transcription regulatorChain: C: PDB Molecule:lysr type regulator of tsambcd; PDBTitle: tsar low resolution crystal structure, tetragonal form
Resolution7.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  RNIIKLALAGLLSVSTFAVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPESKISWVEFPAGPQMLEALNVGSIDLG
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Template Sequence  KHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMY. PAVSPQLRDGTLDFA
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   67..70.........80.........90.........100.........110.........120.........130 .........140.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  STGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPT
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Template Sequence  LTAAHK. . . . HDIDTDLEAQPLYVSDVVIVGQRQHPMANATRLAELQECRWAFSSAPRGPGAIIRNAFARYGLPEPKLGL
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G....GGS
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SGGGGTTS

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   146...150. ........160.........170.........180.........190.........200.........210.........220.
 
   162.......170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  YLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSE
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Template Sequence  VCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDALPNPTIYVLRRHD. . LPVTPAAAGLIRWIQH
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TTTTSS
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   222.......230.........240.........250.........260.........270....... ..280.........290...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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