Job Description P75853 Confidence 98.00% Date Thu Jan 5 12:15:02 GMT 2012 Rank 76 Aligned Residues 210 % Identity 13% Template c3eq1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:porphobilinogen deaminase; PDBTitle: the crystal structure of human porphobilinogen deaminase at2 2.8a resolution Resolution 2.80 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		E	A	L	R	I	G	Y	Q	K	G	S	I	G	M	V	L	A	K	S	.	H	Q	L	L	E	K	R	Y	P	E	S	K	I	S	W	V	E	F	P	A	G	P	Q	M	L	E	A	L	N	V	G	S	I	D	L	G	S	T	G	D	I	P	P	I	F	A	Q	A	A	G	A	D	L	V	Y	V	G	V	E	P
Query Conservation																					.
Alig confidence																					.																					.	.																													.	.
Template Conservation																																										.	.																													.	.
Template Sequence		R	V	I	R	V	G	T	R	K	S	Q	L	A	R	I	Q	T	D	S	V	V	A	T	L	K	A	S	Y	P	G	L	Q	F	E	I	I	A	F	T	K	.	.	E	L	E	H	A	L	E	K	N	E	V	D	L	V	V	H	S	L	K	D	L	P	T	V	L	P	P	G	.	.	F	T	I	G	A	I	C	K
Template Known Secondary structure										S	S																		S	T	T											.	.								T	T	S		S						G	G	G	S		S	S			T	T	.	.
Template Predicted Secondary structure																																										.	.																													.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																								.																																														.
Query SS confidence																								.																																														.
Query Sequence		P	K	P	K	A	E	V	I	L	V	A	E	N	S	P	I	K	T	V	A	D	L	.	K	G	H	K	V	A	F	Q	K	G	S	S	S	H	N	L	L	L	R	A	L	R	Q	A	G	L	K	F	T	D	I	Q	P	T	Y	L	T	P	A	D	A	R	A	A	F	.	Q	Q	G	N	V	D	A	W	A	I	W
Query Conservation																								.																																														.
Alig confidence																								.												.	.	.	.	.	.																													.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		R	E	N	P	H	D	A	V	V	F	H	P	K	F	V	G	K	T	L	E	T	L	P	E	K	S	V	V	G	T	S	S	L	R	.	.	.	.	.	.	R	A	A	Q	L	Q	R	K	F	P	H	L	E	F	R	S	I	Q	G	N	L	N	T	R	L	R	K	L	D	E	Q	Q	E	F	S	A	I	I	L	A
Template Known Secondary structure													G	G	G	T	T			G	G	G	S		T	T										.	.	.	.	.	.										T	T	S							S											T	S	S	S		S
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		D	P	Y	Y	S	A	A	L	L	Q	G	.	G	V	R	V	L	K	D	G	T	D	L	N	Q	T	G	S	F	Y	L	A	A	R	P	Y	A	E	K	N	G	A	F	I	Q	G	V	L	A	T	F	S	E	A	D	A	L	T	R	S	Q	R	E	Q	S	I
Query Conservation													.
Alig confidence													.																							.	.
Template Conservation																																				.	.
Template Sequence		T	A	G	L	Q	R	M	G	W	H	N	R	V	G	Q	I	L	H	P	E	E	C	M	Y	A	V	G	Q	G	A	L	G	V	E	.	.	V	R	A	K	D	Q	D	I	L	D	L	V	G	V	L	H	D	P	E	T	L	L	R	C	I	A	E	R	A	F
Template Known Secondary structure									T		G	G	G							T	T	T			B		T	T	T	T						.	.			T	T									G	G	G
Template Predicted Secondary structure																																				.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions