Job Description P75853 Confidence 71.84% Date Thu Jan 5 12:15:02 GMT 2012 Rank 169 Aligned Residues 76 % Identity 11% Template c2z8fB_ PDB info PDB header:sugar binding protein Chain: B: PDB Molecule:galacto-n-biose/lacto-n-biose i transporter substrate- PDBTitle: the galacto-n-biose-/lacto-n-biose i-binding protein (gl-bp) of the2 abc transporter from bifidobacterium longum in complex with lacto-n-3 tetraose Resolution 1.65 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																							.	.																										.	.	.	.	.													.
Query SS confidence																							.	.																										.	.	.	.	.													.
Query Sequence		A	A	E	S	S	P	E	A	L	R	I	G	Y	Q	K	G	S	I	G	M	V	.	.	L	A	K	S	H	Q	L	L	E	K	R	Y	P	E	S	K	I	S	W	V	E	F	P	A	G	.	.	.	.	.	P	Q	M	L	E	A	L	N	V	G	S	I	.	D	L	G	S	T	G	D	I	P	P	I	F	A	Q
Query Conservation																							.	.																										.	.	.	.	.													.
Alig confidence																							.	.																										.	.	.	.	.													.
Template Conservation
Template Sequence		T	D	D	G	G	V	V	N	I	T	Y	M	H	R	L	P	D	S	E	G	M	T	L	V	N	D	I	V	A	K	W	N	K	Q	H	P	D	I	Q	V	K	A	T	K	F	D	G	K	A	S	D	M	I	K	K	L	E	T	D	V	K	S	G	E	A	P	D	L	A	Q	V	G	Y	A	E	L	P	E	V	F
Template Known Secondary structure						S														T	T	S															T	T									S	S		G	G	G												T				S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		93	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	G	L
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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