Job Description P75853 Confidence 98.38% Date Thu Jan 5 12:15:02 GMT 2012 Rank 62 Aligned Residues 213 % Identity 14% Template c2y7iB_ PDB info PDB header:arginine-binding protein Chain: B: PDB Molecule:stm4351; PDBTitle: structural basis for high arginine specificity in salmonella2 typhimurium periplasmic binding protein stm4351. Resolution 1.90 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.												.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	A	L	R	I	G	Y	Q	K	G	S	I	G	M	V	L	A	K	S	H	Q	.	.	.	.	.	.	.	.	.	.	.	L	L	E	K	R	Y	P	E	S	K	I	S	W	V	E	F	P	A	G	P	Q	M	L	E	A	L	N	V	G	S	I	D	L	G	S	T	G	D	I	P	P	I	F	A	Q	A	A
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.						.											.
Template Conservation																																								.											.
Template Sequence		A	R	T	L	H	F	G	T	S	A	T	Y	A	P	Y	E	F	V	D	A	D	N	K	I	V	G	F	D	I	D	V	A	N	A	V	C	K	E	.	M	Q	A	E	C	S	F	T	N	Q	.	S	F	D	S	L	I	P	S	L	R	F	K	K	F	D	A	V	I	A	G	M	D	M	T	P	K	R	E	Q	Q
Template Known Secondary structure													B	T	T	T	B				T	T	S				S													.	T	T									.		G	G	G							T	T	S		S				S	S		B							T	T
Template Predicted Secondary structure																																								.											.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	L	V	Y	V	G	V	E	P	P	K	P	K	A	E	V	I	L	V	A	E	N	S	P	I	K	T	V	A	D	L	K	G	H	K	V	A	F	Q	K	G	S	S	S	H	N	L	L	L	R	A	L	R	Q	A	G	L	K	F	T	D	I	Q	P	T	Y	L	T	P	A	D	A	R	A	A	F	Q	Q
Query Conservation
Alig confidence			.	.	.	.	.																																																		.	.	.	.	.	.
Template Conservation			.	.	.	.	.																																																		.	.	.	.	.	.
Template Sequence		V	.	.	.	.	.	S	F	S	Q	P	Y	Y	E	G	L	S	A	V	V	V	T	R	K	G	A	Y	H	T	F	A	D	L	K	G	K	K	V	G	L	E	N	G	T	T	H	Q	R	Y	L	Q	D	K	Q	Q	.	.	.	.	.	.	A	I	T	P	V	A	Y	D	S	Y	L	N	A	F	T	D	L	K	N
Template Known Secondary structure		S	.	.	.	.	.				S		S	B											T	T	T			S	G	G	G	G	T	T							T	T	S											T	.	.	.	.	.	.	T	S						S											T
Template Predicted Secondary structure			.	.	.	.	.																																																		.	.	.	.	.	.
Template SS confidence
		100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	V	D	A	W	A	I	W	D	P	Y	Y	S	A	A	L	L	Q	G	G	V	R	V	L	K	D	G	T	D	L	N	Q	T	G	S	F	Y	L	A	A	R	P	Y	A	E	K	N	G	A	F	I	Q	G	V	L	A	T	F	S	E	A	D	A	L	T	R	S	Q	R	E	Q	S	I	A	L	L	A	K	T
Query Conservation
Alig confidence																																																				.	.	.	.																.
Template Conservation																																																				.	.	.	.																.
Template Sequence		N	R	L	E	G	V	F	G	D	V	A	A	I	G	K	W	L	K	N	N	P	D	Y	A	I	M	D	E	R	A	S	D	P	D	Y	Y	G	K	G	L	G	I	A	V	R	K	D	N	D	A	.	.	.	.	L	L	Q	E	I	N	A	A	L	D	K	V	K	A	S	.	P	E	Y	A	Q	M	Q	E	K	W
Template Known Secondary structure		T	S		S														T	T		T	T					S	S		B			T	T	T	S		S		B						T	T				.	.	.	.														T	S	.
Template Predicted Secondary structure																																																				.	.	.	.																.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.
		255	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		244	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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