Job Description P75853 Confidence 50.86% Date Thu Jan 5 12:15:02 GMT 2012 Rank 191 Aligned Residues 65 % Identity 15% Template c2v84A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:spermidine/putrescine abc transporter, periplasmic PDBTitle: crystal structure of the tp0655 (tppotd) lipoprotein of2 treponema pallidum Resolution 1.78 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		A	L	R	I	G	Y	Q	K	G	S	I	G	M	V	L	A	K	S	H	Q	L	L	E	K	R	Y	P	E	S	K	I	S	W	V	E	F	P	A	G	P	Q	M	L	E	A	L	N	V	G	S	I	.	.	D	L	G	S	T	G	D	I	P	P	I	F	A	Q	A	A	G	A
Query Conservation																																																					.	.
Alig confidence																				.	.	.						.																									.	.
Template Conservation																				.	.	.						.
Template Sequence		V	L	Y	L	Y	N	W	T	Y	Y	T	P	T	S	L	I	K	K	.	.	.	F	E	Q	Q	Y	.	N	V	Q	V	V	Y	D	D	Y	A	S	N	E	D	M	F	A	K	L	S	I	G	A	S	G	Y	D	L	V	V	P	S	G	D	F	V	S	I	M	K	R	K	H	L
Template Known Secondary structure									T	T	T	S								.	.	.						.	T									S										S	S	S			S		S					B										T	T
Template Predicted Secondary structure																				.	.	.						.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions