Job Description P75853 Confidence 91.76% Date Thu Jan 5 12:15:02 GMT 2012 Rank 149 Aligned Residues 218 % Identity 10% Template c2v3tA_ PDB info PDB header:receptor Chain: A: PDB Molecule:glutamate receptor delta-2 subunit synonym PDBTitle: structure of the ligand-binding core of the ionotropic2 glutamate receptor-like glurdelta2 in the apo form Resolution 2.75 Å

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		26	.	.	.	30	.	.	.	.				.	.														.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure											.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.
Query SS confidence											.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.
Query Sequence		P	E	A	L	R	I	G	Y	Q	.	.	.	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	G	M	V	L	A	K	S	H	Q	L	L	E	K	R	Y	P	E	S	K	I	S	W	V	E	F	P	A	.	.	.	.	.	.	.	G	P	Q	M	L	E	A	L	N	V	G	S	I	D	L	G	S
Query Conservation											.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.
Alig confidence											.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.												.	.	.	.	.	.	.
Template Conservation																																													.	.
Template Sequence		G	V	V	L	R	V	V	T	V	L	E	E	P	F	V	X	V	S	E	N	V	L	G	K	P	K	K	Y	Q	G	F	S	I	D	V	L	D	A	L	S	N	Y	L	.	.	G	F	N	Y	E	I	Y	V	A	P	D	H	K	Y	G	S	P	T	W	N	G	L	V	G	E	L	V	F	K	R	A	D	I	G	I
Template Known Secondary structure												B	T	T	T	B							T	T	S						S														.	.	T									T	T																	T	T	S		S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	D	I	P	P	I	F	A	Q	A	A	G	A	D	L	V	Y	V	G	V	E	P	P	K	P	K	A	E	V	I	L	V	A	E	N	S	P	I	K	T	V	A	D	L	K	G	H	K	V	A	F	Q	K	G	S	S	S	H	N	L	L	L	R	A	L	R	Q	A	G	L	K	F	T	D	I	Q	P	T	Y
Query Conservation
Alig confidence																								.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		S	A	L	T	I	T	P	D	R	E	N	V	V	D	F	T	T	R	Y	X	D	Y	.	.	.	.	S	V	G	V	L	L	R	R	S	I	Q	S	L	Q	D	L	S	K	Q	T	D	I	P	Y	G	T	V	L	D	S	A	V	Y	Q	H	V	R	X	K	G	L	N	P	S	X	Y	S	Q	X	W	R	X	I	N
Template Known Secondary structure														S						S				.	.	.	.												S					T	T			S	S					B	T	T	S											T
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	P	A	D	A	R	A	A	F	Q	Q	G	N	V	D	A	W	A	I	W	D	P	Y	Y	S	A	A	L	L	Q	G	G	V	R	V	L	K	D	G	T	D	L	N	Q	T	G	S	F	Y	L	A	A	R	P	Y	A	E	K	N	G	A	F	I	Q	G	V	L	A	T	F	S	E	A	D	A	L	T	R	S
Query Conservation
Alig confidence																																																									.	.	.				.	.	.	.	.
Template Conservation																																																									.	.	.				.	.	.	.	.
Template Sequence		N	N	V	L	E	S	Q	A	G	I	Q	K	V	K	Y	G	N	Y	A	F	V	W	D	A	A	V	L	E	Y	V	A	I	N	D	P	D	C	S	F	Y	T	V	T	V	A	D	R	G	Y	G	I	A	L	Q	H	.	.	.	G	S	P	.	.	.	.	.	Y	R	D	V	F	S	Q	R	I	L	E	L	Q	Q
Template Known Secondary structure					B												S	S																T		T	T										S									T	.	.	.	T		S	.	.	.	.	.	S
Template Predicted Secondary structure																																																									.	.	.				.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	E	Q	S	I	A	L	L	A	K	T	M	G	L	P
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		S	.	G	D	X	D	I	L	K	H	K	W	W	P	K	N
Template Known Secondary structure			.	T										S			S
Template Predicted Secondary structure			.
Template SS confidence
		246		.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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