Job Description P75853 Confidence 98.04% Date Thu Jan 5 12:15:02 GMT 2012 Rank 73 Aligned Residues 204 % Identity 15% Template c2pyyB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:ionotropic glutamate receptor bacterial homologue; PDBTitle: crystal structure of the glur0 ligand-binding core from nostoc2 punctiforme in complex with (l)-glutamate Resolution 2.10 Å

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		28	.	30	.	.	.	.	.	.								.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure											.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.
Query Sequence		A	L	R	I	G	Y	Q	K	G	.	.	.	.	.	.	.	S	I	G	M	V	L	A	K	S	H	Q	L	L	E	K	R	Y	P	E	S	K	I	S	W	V	E	F	P	A	G	P	Q	M	L	E	A	L	N	V	G	S	I	D	L	G	S	T	G	D	I	P	P	I	F	A	Q	A	A	G	A	D	L	V	Y
Query Conservation											.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																	.	.																																									.	.	.	.	.	.
Template Conservation																																		.	.																																									.	.	.	.	.	.
Template Sequence		P	L	L	V	A	T	R	V	I	P	P	F	V	L	S	N	L	S	G	F	S	I	D	L	W	R	S	I	A	T	Q	I	.	.	G	I	E	S	K	L	I	E	Y	S	S	V	P	E	L	I	S	A	I	K	D	N	K	V	N	L	G	I	A	A	I	S	I	T	A	E	R	E	Q	N	.	.	.	.	.	.
Template Known Secondary structure										B	T	T	T	B	B				B	S														.	.	T									S	S										T	T	S	S	S				S	S		B									.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.																																									.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	V	E	P	P	K	P	K	A	E	V	I	L	V	A	E	N	S	P	I	K	T	V	A	D	L	K	G	H	K	V	A	F	Q	K	G	S	S	S	H	N	L	L	L	R	A	L	R	Q	A	G	L	K	F	T	D	I	Q	P	T	Y	L	T	P	A	D	A	R	A	A	F	Q	Q	G	N	V	D	A	W
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.
Template Sequence		F	D	F	S	L	P	I	F	A	S	G	L	Q	I	M	V	R	N	G	D	I	R	S	I	D	D	L	P	G	K	V	V	A	T	T	A	G	S	T	A	A	T	Y	L	R	E	H	.	.	.	.	.	.	.	.	H	I	S	V	L	E	V	P	K	I	E	E	A	Y	K	A	L	Q	T	K	K	A	D	A	V
Template Known Secondary structure		S				S		S																S	G	G	G		T	T	S						T	T	S									T	.	.	.	.	.	.	.	.	T							S	S										T	T	S	S	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.									.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	W	D	P	Y	Y	S	A	A	L	L	Q	G	G	V	R	V	L	K	D	G	T	D	L	N	Q	T	G	S	F	Y	L	A	A	R	P	Y	A	E	K	N	G	A	F	I	Q	G	V	L	A	T	F	S	E	A	D	A	L	T	R	S	Q	R	E	Q	S	I	A	L	L	A	K	T	M	G
Query Conservation
Alig confidence																																					.	.	.	.						.	.	.	.																.
Template Conservation																																					.	.	.	.						.	.	.	.																.
Template Sequence		V	F	D	A	P	V	L	L	F	Y	A	A	N	E	G	K	G	K	V	E	I	V	G	S	I	L	R	E	E	S	Y	G	I	I	L	.	.	.	.	P	N	N	S	P	.	.	.	.	Y	R	K	P	I	N	Q	A	L	L	N	L	K	E	N	.	G	T	Y	Q	S	L	Y	D	K	W	F	D
Template Known Secondary structure													T	T	T	T	T	T	T																		.	.	.	.		T	T		T	.	.	.	.	T														T	.	S										S
Template Predicted Secondary structure																																					.	.	.	.						.	.	.	.																.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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