Return to main results Retrieve Phyre Job Id

Job DescriptionP75853
Confidence95.38%DateThu Jan 5 12:15:02 GMT 2012
Rank129Aligned Residues102
% Identity18%Templatec2hauA_
PDB info PDB header:metal transportChain: A: PDB Molecule:serotransferrin; PDBTitle: apo-human serum transferrin (non-glycosylated)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100...... ...110.........120......
Predicted Secondary structure 






















.......













Query SS confidence 




















































. . . . . . .



















Query Sequence  PESKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPP. . . . . . . KPKAEVILVAENSPIKTVAD
Query Conservation   

 

            

  
  
               
     
     .......      


   
 
    
Alig confidence 




















































.......














.



Template Conservation      
 

   
  


  
  
 

   

  


 
      
  
  
           
 




 
 
 
.    
Template Sequence  DGPSVACVKKASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKKDSGF. QXNQ
Template Known Secondary structure  TS

SSTTS

B
STTT
SS
SSS


TT
S
.
GGG
Template Predicted Secondary structure 





























.
Template SS confidence 















































































   33......40.........50.........60.........70.........80.........90.........100....... ..110.
 
   127..130..... ....140.........150......
Predicted Secondary structure 



..









Query SS confidence 








. .




















Query Sequence  LKGHKVAFQ. . KGSSSHNLLLRALRQAGLKFT
Query Conservation 



 
   ..                     
Alig confidence 








..




















Template Conservation 









 
 
 

 


  
      
 
Template Sequence  LRGKKSCHTGLGRSAGWNIPIGLLYCDLPEPR
Template Known Secondary structure 
SS


S
TT
TTTTGGGS
S

Template Predicted Secondary structure 




















Template SS confidence 































   112.......120.........130.........140...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions