 |
Job Description | P0ACZ4 | Confidence | 90.23% | Date | Thu Jan 5 11:19:30 GMT 2012 |
Rank | 199 | Aligned Residues | 51 |
% Identity | 20% | Template | d2esna1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| LysR-like transcriptional regulators
|
Resolution | 2.10 |
|
  |   |
139 | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | K | L | D | S | L | S | K | Q | E | I | S | V | M | R | Y | I | L | D | G | K | D | N | N | D | I | A | E | K | M | F | I | S | N | K | T | V | S | T | Y | K | S | R | L | M | E | K | L | E | C | K |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |   |
|   |   |
Template Sequence |   |
P | L | L | R | R | L | D | L | N | L | L | L | V | F | D | A | L | Y | R | H | R | N | V | G | T | A | A | S | E | L | A | I | S | A | S | A | F | S | H | A | L | G | R | L | R | Q | G | L | D | D | E |
Template Known Secondary structure |   |
|
| T | T | T | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|