Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACZ4
Confidence62.38%DateThu Jan 5 11:19:30 GMT 2012
Rank400Aligned Residues51
% Identity20%Templated2dk5a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain RPO3F domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150..... ....160.........170.........180.....
Predicted Secondary structure 




















....





Query SS confidence 




















. . . .





























Query Sequence  TSDQQKLDSLSKQEISVMRYI. . . . LDGKDNNDIAEKMFISNKTVSTYKSRLMEK
Query Conservation           

 

  

   ....  
 





  
 

  

  
   
  
Alig confidence 




















....





























Template Conservation   
 
 
   
   
  

 

  

  


   
  

 
    
 



 

 
Template Sequence  SQNAGKMKGSDNQEKLVYQIIEDAGNKGIWSRDVRYKSNLPLTEINKILKNLESK
Template Known Secondary structure 








S
SS
TT
TT

T
Template Predicted Secondary structure 












Template SS confidence 






















































   910.........20.........30.........40.........50.........60...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions