Job Description P0ACZ4 Confidence 99.73% Date Thu Jan 5 11:19:30 GMT 2012 Rank 24 Aligned Residues 109 % Identity 14% Template c3sztB_ PDB info PDB header:transcription Chain: B: PDB Molecule:quorum-sensing control repressor; PDBTitle: quorum sensing control repressor, qscr, bound to n-3-oxo-dodecanoyl-l-2 homoserine lactone Resolution 2.55 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	N	G	F	V	S	K	K	E	G	M	N	N	I	I	A	A	I	E	A	A	K	N	G	Y	C	Y	F	P	F	S	L	N	R	F	V	G	S	L	T	S	D	Q	Q	K	L	D	S	L	S	K	Q	E	I	S	V	M	R	Y	I	L	D	G	K	D	N	N	D	I	A	E	K	M	F	I	S	N	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	M	L	S	L	V	R	S	S	S	I	A	A	T	E	I	L	E	K	E	S	F	L	L	W	I	T	S	M	L	Q	A	T	F	G	D	L	L	A	P	R	I	V	P	E	S	N	V	R	L	T	A	R	E	T	E	M	L	K	W	T	A	V	G	K	T	Y	G	E	I	G	L	I	L	S	I	D	Q	R	T
Template Known Secondary structure																																													G	G	G	G																T	T											T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	T	Y	K	S	R	L	M	E	K	L	E	C	K	S	L	M	D	L	Y	T	F	A	Q	R	N	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	F	H	I	V	N	A	M	R	K	L	N	S	S	N	K	A	E	A	T	M	K	A	Y	A	I	G	L
Template Known Secondary structure													T	T		S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions