 |
Job Description | P0ACZ4 | Confidence | 54.49% | Date | Thu Jan 5 11:19:30 GMT 2012 |
Rank | 482 | Aligned Residues | 31 |
% Identity | 16% | Template | c3osgA_ |
PDB info |
PDB header:transcription/dna | Chain: A: PDB Molecule:myb21; |
PDBTitle: the structure of protozoan parasite trichomonas vaginalis myb2 in2 complex with mre-1-12 dna
|
Resolution | 2.00 Å |
|
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | |
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | D | N | N | D | I | A | E | K | M | . |
F | I | S | N | K | T | V | S | T | Y | K | S | R | L | M | E | K | L | E | C |
Query Conservation |   |
|   |
|
|
|
|
|
|   |   |
| . |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|
|   |
|
|   |   |
|   |
|
|   |   |   |
Template Sequence |   |
G | R | Q | W | A | I | I | A | K | F | F | P | G | R | T | D | I | H | I | K | N | R | W | V | T | I | S | N | K | L | G | I |
Template Known Secondary structure |   |
| S |
|  |  |  |  |  | T | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
119 | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|