Job Description P0ACZ4 Confidence 99.70% Date Thu Jan 5 11:19:30 GMT 2012 Rank 39 Aligned Residues 167 % Identity 13% Template c3dzdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	I	I	I	D	D	H	P	L	A	I	A	A	I	R	N	L	L	I	K	N	D	I	E	I	L	A	E	L	T	E	G	G	S	A	V	Q	R	V	E	T	L	K	P	D	I	V	I	I	D	V	D	I	P	G	V	N	G	I	Q	V	L	E	T	L	R	K	R	Q	Y	S	G	I	I	I	I	V	S	A
Query Conservation
Alig confidence																													.
Template Conservation																													.
Template Sequence		R	V	L	V	V	D	D	E	E	S	I	T	S	S	L	S	A	I	L	E	E	E	G	Y	H	P	D	.	T	A	K	T	L	R	E	A	E	K	K	I	K	E	L	F	F	P	V	I	V	L	D	V	W	X	P	D	G	D	G	V	N	F	I	D	F	I	K	E	N	S	P	D	S	V	V	I	V	I	T	G
Template Known Secondary structure								S															T	T					.			S	S											S			S						S			T	T			T	T	T										T	T
Template Predicted Secondary structure																													.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.
Query Sequence		K	N	D	H	F	Y	G	K	H	C	A	D	A	G	A	N	G	F	V	S	K	K	E	G	M	N	N	I	I	A	A	I	E	A	A	K	N	G	Y	C	Y	F	P	F	S	L	N	R	F	V	G	S	L	T	S	D	.	.	.	.	.	Q	Q	K	L	D	S	L	S	K	Q	E	I	S	V	M	R	Y	I	L
Query Conservation																																																										.	.	.	.	.
Alig confidence																																																										.	.	.	.	.
Template Conservation
Template Sequence		H	G	S	V	D	T	A	V	K	A	I	K	K	G	A	Y	E	F	L	E	K	P	F	S	V	E	R	F	L	L	T	I	K	H	A	F	E	E	Y	S	K	K	A	P	P	Q	E	E	I	E	F	V	G	E	H	P	K	I	L	E	I	K	R	L	I	P	K	I	A	K	S	K	A	P	V	L	I	T	G	E
Template Known Secondary structure		S	S												T							S	S																		S															S															T	S		S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		157	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	K	D	N	N	D	I	A	E	K	M	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	T	G	K	E	I	V	A	R	L	I	H
Template Known Secondary structure		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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